Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.204.v1.A.SL1-1

Possible name(s)

SRSF1; SRSF3; SRSF7

Gene model

KH2012:KH.C3.204

Location

KhC3 [1,186,680 / 1,188,406]

Sequences

Amino acid sequence

Length: 187

>KH.C3.204.v1.A.SL1-1
LKMSYRNSGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNR
DAEDAVRALDGRTVCGVRARVEMSSGQSRRGNDRDRGPPRGRRDDYYDRNRRGRYDRSRS
KSPRRHSRSRSRSPRRERRRNSYSRSPVTKDRGSQSPRRSVSPPRRSLSRSVSPYGNGRD
SRSRSRS

Nucleotide sequence

Length: 801

>KH2012:KH.C3.204.v1.A.SL1-1
TAGCACAATTTAAAAGTAACTGAAAATGTCTTACCGAAACTCTGGTCCCTTGGATTGCAA
GGTTTATGTTGGAAATCTTGGCAGTCAAGGATCTAAAAATGAACTTGAACGTGTTTTTGG
GTACTATGGTGCTCTCAAAAACGTGTGGGTCGCAAGAAACCCTCCGGGTTTTGCTTTTGT
TGAGTTTGAAGATAATAGAGATGCAGAAGATGCCGTTCGTGCACTTGATGGAAGAACCGT
TTGTGGAGTAAGAGCGAGAGTTGAAATGTCATCTGGACAATCCCGTCGTGGAAATGATAG
AGATCGTGGACCACCACGCGGTCGACGAGATGATTATTATGATAGAAATCGACGTGGTAG
ATATGACAGATCTCGCTCAAAGAGTCCACGCCGTCATTCAAGAAGTCGCAGTAGAAGTCC
TCGCAGGGAGAGAAGAAGAAATAGCTACAGCAGATCCCCAGTAACGAAAGATAGGGGTTC
ACAAAGTCCAAGAAGATCTGTATCTCCACCACGAAGATCCTTAAGCAGAAGTGTAAGTCC
ATATGGTAATGGACGCGACAGTAGAAGCAGAAGTCGTTCATAATATAAAACACAGAAGTT
GCTGCCAAGAAACAACTTCTATATGCTGTACAAACCATCAACAATGTTTGTAACAAGCAG
AACTATACATAGCACTACAATTGGGGTACTGTTGTTTGTGGCTATGTTTTATGCATTTTA
AATTTTGAAAGCGCTGTATATCTGCTATAATAATAAAACATTGTTTAAATAAAATTCATG
TATTTTTCGTGATCATTTTAG

InterProScan

Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-88] 1.6E-22
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[12-115] 5.24E-24
ProSiteProfiles	RRM_dom (IPR000504) - T[13-86] 16.534
SMART	RRM_dom (IPR000504) - T[14-82] 3.3E-18
Pfam	RRM_dom (IPR000504) - T[15-76] 2.5E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRSF3_HUMAN	72.632 %	145	1.5E-44
SRSF7_HUMAN	69.62 %	122	6.4E-35