- Transcript 'KH2012:KH.C2.659.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.659.v1.A.SL2-1
Possible name(s)
CNBP; ZCCHC13; ZCCHC7
Gene model
Location
KhC2 [2,702,569 / 2,704,300]
Amino acid sequence
Length: 440
>KH.C2.659.v1.A.SL2-1
QGNMDFKKETFAVESSMHEDSDSDFMGSELEFQLYSQIHYHQEPVIPEVTGTEKLPASSN
RTGTNHFDQILEQKGGEDHLSKFLTQKSLAFYYEFDNQCSSSNERDVREQKFSHLVDDNS
DSDISDLEKWEILDDVKDSNEENTIHIHVSEDAVTSDDSKACWKICKEDILAGLNKYRDT
RRYFGDSNVRCKNCDLTGHIANECSKPKKVKPCFQCGIKGHMAKFCPKHIPVSRRHLSFS
CNRCEQMGHIQSECPDLWRQYHKTTKAGSLVTSSLPLPMSKKKCCYNCGKRGHFGFDCKK
SRSQTFAAVTQPTVFRYDHWIWIEHAKKSSGKSSKRPMVKTKDKTQINKNVQVTRTVHFN
LAKEALTVKRNDGVNNKKRKKETKKNIKFKKEKDLGDYSGKKSKKPKKSLKRKAVNFKDE
NFKQNKKFKLNKKLGKKIKS
Nucleotide sequence
Length: 1,731
>KH2012:KH.C2.659.v1.A.SL2-1
CAAGGAAACATGGATTTTAAAAAAGAAACATTTGCTGTTGAATCATCAATGCATGAAGAC
AGTGACTCAGATTTCATGGGAAGTGAACTCGAGTTTCAACTTTACAGTCAGATTCATTAT
CACCAAGAACCTGTGATTCCAGAAGTTACAGGAACGGAAAAATTACCTGCTTCCTCAAAT
AGAACTGGAACGAATCATTTCGATCAAATTTTGGAACAAAAAGGGGGAGAGGATCATTTA
AGTAAATTTTTAACACAAAAAAGTTTGGCTTTTTACTATGAGTTTGATAATCAGTGTTCA
TCAAGTAATGAGCGTGATGTGAGGGAACAGAAGTTTTCACATCTGGTTGATGATAATAGT
GACTCGGATATAAGTGATCTGGAAAAATGGGAAATACTTGATGATGTGAAAGATTCCAAT
GAAGAGAATACTATTCACATACATGTTTCAGAGGATGCAGTTACTAGTGATGATTCTAAA
GCTTGTTGGAAGATTTGCAAAGAGGACATACTAGCTGGACTGAATAAATATCGAGATACA
AGAAGGTACTTTGGTGATTCTAATGTTCGGTGCAAAAATTGTGACCTGACTGGTCACATT
GCCAATGAATGCTCTAAACCAAAGAAAGTAAAGCCGTGTTTTCAGTGTGGGATAAAAGGA
CACATGGCAAAGTTTTGTCCCAAGCATATTCCTGTCTCTCGTCGACATTTAAGTTTTAGC
TGCAATCGATGTGAGCAAATGGGTCACATACAGTCTGAGTGTCCTGATTTGTGGCGCCAA
TATCATAAGACAACTAAAGCTGGTTCCTTAGTCACCTCATCCTTGCCACTACCCATGAGC
AAGAAGAAATGCTGCTACAACTGTGGAAAGCGTGGACATTTTGGCTTTGATTGTAAGAAA
TCAAGAAGTCAGACATTTGCTGCTGTTACACAGCCCACTGTATTTAGGTATGATCATTGG
ATTTGGATTGAACATGCGAAAAAATCATCTGGAAAAAGTAGTAAACGACCCATGGTTAAA
ACAAAAGATAAAACACAAATTAACAAAAACGTCCAGGTAACTAGAACTGTTCATTTTAAC
CTTGCCAAGGAAGCTTTGACGGTGAAAAGAAATGATGGCGTAAACAATAAAAAAAGGAAA
AAAGAAACCAAAAAGAATATCAAATTTAAAAAAGAAAAAGATTTGGGTGATTATTCAGGG
AAAAAATCTAAGAAACCAAAAAAATCTTTAAAACGCAAAGCAGTGAATTTCAAGGATGAA
AATTTTAAACAAAACAAGAAGTTCAAGTTAAATAAGAAATTGGGGAAAAAAATCAAAAGC
TGATCATAATTTTAACTTCAGAAACAGAACTGCTACCTAGTAAATACTAAATACAAGACT
TAGTTAATTATCTTTTGTTGATCTTACAGCTTGCTTTAGTCTTACCACCTTACTGCTAAT
GTTTAAATAGCAAGCAGTGCATATTGTATTGTTGTAAAACTAAATAGTGTCTCAACTCAA
TAGTCTAATTTTTAAGTGCTGCTGAGCTATTGTTTATGTCACTTGTGTCTTGTTTACATA
ATGTGTTTGTTTTACCATTTTATTCTTCTTTTGGTGGTCGGTTATTGCATTTCACATGTT
CTGAATTGAAGTGATTCATAATTTGGTTATCGTCAATTCATTTATGAACTAAAACTCCCA
AAAAGACGGCTATGTGTGTTTTAATGTAATTGTGTTTTTGTTTTACACCAG
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[186-229] 3.33E-9 - T[238-263] 3.14E-5 - T[281-304] 2.09E-5 |
| SMART |
Znf_CCHC (IPR001878) - T[190-206] 0.045 - T[212-228] 0.01 - T[240-256] 0.014 - T[284-300] 0.016 |
| Pfam |
Znf_CCHC (IPR001878) - T[212-228] 0.003 - T[241-255] 0.0011 - T[284-300] 4.8E-4 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[213-228] 9.57 - T[241-256] 8.96 - T[285-300] 10.197 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZCHC7_HUMAN | 31.132 % | 106 | 9.67E-25 |
