- Transcript 'KH2012:KH.C2.659.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.659.v1.A.SL1-1
Possible name(s)
CNBP; ZCCHC13; ZCCHC7
Gene model
Location
KhC2 [2,702,147 / 2,704,300]
Amino acid sequence
Length: 441
>KH.C2.659.v1.A.SL1-1
KQGNMDFKKETFAVESSMHEDSDSDFMGSELEFQLYSQIHYHQEPVIPEVTGTEKLPASS
NRTGTNHFDQILEQKGGEDHLSKFLTQKSLAFYYEFDNQCSSSNERDVREQKFSHLVDDN
SDSDISDLEKWEILDDVKDSNEENTIHIHVSEDAVTSDDSKACWKICKEDILAGLNKYRD
TRRYFGDSNVRCKNCDLTGHIANECSKPKKVKPCFQCGIKGHMAKFCPKHIPVSRRHLSF
SCNRCEQMGHIQSECPDLWRQYHKTTKAGSLVTSSLPLPMSKKKCCYNCGKRGHFGFDCK
KSRSQTFAAVTQPTVFRYDHWIWIEHAKKSSGKSSKRPMVKTKDKTQINKNVQVTRTVHF
NLAKEALTVKRNDGVNNKKRKKETKKNIKFKKEKDLGDYSGKKSKKPKKSLKRKAVNFKD
ENFKQNKKFKLNKKLGKKIKS
Nucleotide sequence
Length: 2,153
>KH2012:KH.C2.659.v1.A.SL1-1
GTGCAATTGACGCCTGCTGTGTAATGTTTGTTAGCTTTTAAAAACATGGTAAACGTCACA
AAAGGAGTTCTTGTCGAGTGCGATCCTGCTATGAAACAATTTCTTTTGCATTTGGATGAT
TCAAACGCTCTTGGAAAAGGGCATAAGTTTATACTTCAGGACTTGGACGAGACACATCTT
TTTATAGCTGTTGACGTAATACAACAAATACAAGAGAGAATTGATGAACTTATGGACAGA
AACTCATTTGCTCCTGGTCAAGTAGCTGCATAATTTTTCGCTCACATATAAAGAATAATA
TACTTACCCAACTAGTTGTTTTTTTTAACAAAACCGTTCATTGACACCTATTTCGTGAAA
TACTGCTTATTTATAACATTTACCGCTGCTTCTACCATTCATTGTTTTTTTTCTATTAAA
AGCAAGGAAACATGGATTTTAAAAAAGAAACATTTGCTGTTGAATCATCAATGCATGAAG
ACAGTGACTCAGATTTCATGGGAAGTGAACTCGAGTTTCAACTTTACAGTCAGATTCATT
ATCACCAAGAACCTGTGATTCCAGAAGTTACAGGAACGGAAAAATTACCTGCTTCCTCAA
ATAGAACTGGAACGAATCATTTCGATCAAATTTTGGAACAAAAAGGGGGAGAGGATCATT
TAAGTAAATTTTTAACACAAAAAAGTTTGGCTTTTTACTATGAGTTTGATAATCAGTGTT
CATCAAGTAATGAGCGTGATGTGAGGGAACAGAAGTTTTCACATCTGGTTGATGATAATA
GTGACTCGGATATAAGTGATCTGGAAAAATGGGAAATACTTGATGATGTGAAAGATTCCA
ATGAAGAGAATACTATTCACATACATGTTTCAGAGGATGCAGTTACTAGTGATGATTCTA
AAGCTTGTTGGAAGATTTGCAAAGAGGACATACTAGCTGGACTGAATAAATATCGAGATA
CAAGAAGGTACTTTGGTGATTCTAATGTTCGGTGCAAAAATTGTGACCTGACTGGTCACA
TTGCCAATGAATGCTCTAAACCAAAGAAAGTAAAGCCGTGTTTTCAGTGTGGGATAAAAG
GACACATGGCAAAGTTTTGTCCCAAGCATATTCCTGTCTCTCGTCGACATTTAAGTTTTA
GCTGCAATCGATGTGAGCAAATGGGTCACATACAGTCTGAGTGTCCTGATTTGTGGCGCC
AATATCATAAGACAACTAAAGCTGGTTCCTTAGTCACCTCATCCTTGCCACTACCCATGA
GCAAGAAGAAATGCTGCTACAACTGTGGAAAGCGTGGACATTTTGGCTTTGATTGTAAGA
AATCAAGAAGTCAGACATTTGCTGCTGTTACACAGCCCACTGTATTTAGGTATGATCATT
GGATTTGGATTGAACATGCGAAAAAATCATCTGGAAAAAGTAGTAAACGACCCATGGTTA
AAACAAAAGATAAAACACAAATTAACAAAAACGTCCAGGTAACTAGAACTGTTCATTTTA
ACCTTGCCAAGGAAGCTTTGACGGTGAAAAGAAATGATGGCGTAAACAATAAAAAAAGGA
AAAAAGAAACCAAAAAGAATATCAAATTTAAAAAAGAAAAAGATTTGGGTGATTATTCAG
GGAAAAAATCTAAGAAACCAAAAAAATCTTTAAAACGCAAAGCAGTGAATTTCAAGGATG
AAAATTTTAAACAAAACAAGAAGTTCAAGTTAAATAAGAAATTGGGGAAAAAAATCAAAA
GCTGATCATAATTTTAACTTCAGAAACAGAACTGCTACCTAGTAAATACTAAATACAAGA
CTTAGTTAATTATCTTTTGTTGATCTTACAGCTTGCTTTAGTCTTACCACCTTACTGCTA
ATGTTTAAATAGCAAGCAGTGCATATTGTATTGTTGTAAAACTAAATAGTGTCTCAACTC
AATAGTCTAATTTTTAAGTGCTGCTGAGCTATTGTTTATGTCACTTGTGTCTTGTTTACA
TAATGTGTTTGTTTTACCATTTTATTCTTCTTTTGGTGGTCGGTTATTGCATTTCACATG
TTCTGAATTGAAGTGATTCATAATTTGGTTATCGTCAATTCATTTATGAACTAAAACTCC
CAAAAAGACGGCTATGTGTGTTTTAATGTAATTGTGTTTTTGTTTTACACCAG
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[187-230] 3.33E-9 - T[239-264] 3.14E-5 - T[282-305] 2.09E-5 |
| SMART |
Znf_CCHC (IPR001878) - T[191-207] 0.045 - T[213-229] 0.01 - T[241-257] 0.014 - T[285-301] 0.016 |
| Pfam |
Znf_CCHC (IPR001878) - T[213-229] 0.003 - T[242-256] 0.0011 - T[285-301] 4.8E-4 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[214-229] 9.57 - T[242-257] 8.96 - T[286-301] 10.197 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZCHC7_HUMAN | 31.132 % | 106 | 8.2E-25 |
