- Transcript 'KH2012:KH.C5.54.v2.A...' >
- Transcript 'KH2012:KH.C5.54.v1.A...' >
- Transcript 'KH2012:KH.C5.54.v3.A...' >
- Transcript 'Moocci.CG.ELv1_2.S41...' >
- Transcript 'KH2012:KH.C2.598.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.598.v2.A.SL1-1
Possible name(s)
BIVM-ERCC5; FEN1; GEN1
Gene model
Location
KhC2 [4,148,992 / 4,154,475]
Amino acid sequence
Length: 721
>KH.C2.598.v2.A.SL1-1
VCFVGFFNFLWAMGVQGLWDILQEVKTTKKLCDLKDRTYAVDLATWICEAESVAALKHAI
AKPYLRNLFFRVITFTRNGTRLIFVTDGKAPELKWKTMAHRMDVRQEVQKGTNVSHGSRS
RLNARFNECCQLLDQLGIPWIKSEGEAEATCAALNSVGVVDGCMTNDSDTFLYGAKSVYR
NLSMTTDRNDIDVECYELCDIESKLQLNRKSLIALGLLLGCDYSPQGVPGVGKKQAIMLL
SSWKNIDPLEKLKAWKSESVLSPTVTKKPTHCSACSHIGSKRDHKKNGCDICGSECGSET
ALPVDCSCEWHVLENEQRKHNLENGIKKKALLVENFPDPKIIREFTRNKLGSQPLNHLSP
RQPTLFGAVQYLCEKLEWQVKYAVDKVLPLLTYWLMQNEGTINEISFQRIVRTRIKDRVP
SFEVKWFLSGIDDVTEAVTLEPQELVTKKFPEASKNFFAEQQAKKKKTKSKGAKQQKIPA
AKMTDFYKITKTTELTSKPLITKGNDLKNTSTTPTAANTAAKNSEISPIQSEYVKNDLKR
SSRPTSSCTVVSKSNDDDDVIFVSESSPAKQDLDVLHLIESVASFKITSDESEPVASPVS
VSQQTLPFRDLTNARETETATKTCELTFPDESFDINFSLGGLHTPCKATNPHSVDDSFDL
FSRSPLQPTSTVSNVTKPSPAKSQVSASPVTPCILPPKSPPSPVFMTLAERLRLRASGSS
N
Nucleotide sequence
Length: 2,289
>KH2012:KH.C2.598.v2.A.SL1-1
CAATAAGTTTGCTTTGTAGGTTTTTTTAATTTTTTGTGGGCGATGGGTGTTCAGGGTTTG
TGGGATATTCTACAAGAAGTTAAAACCACAAAAAAGTTGTGTGATTTAAAAGACCGGACG
TACGCTGTTGACCTAGCTACATGGATTTGCGAAGCGGAGTCGGTTGCCGCGTTAAAACAT
GCCATTGCCAAGCCCTACTTAAGAAATCTATTTTTTCGTGTGATCACATTTACGAGAAAT
GGGACTCGCCTGATTTTCGTAACGGACGGAAAAGCGCCAGAATTGAAATGGAAAACAATG
GCACACAGAATGGATGTTAGGCAAGAAGTACAAAAAGGAACGAATGTTTCACATGGGTCA
AGAAGTCGTTTGAATGCTCGATTTAATGAGTGTTGCCAGTTGCTTGACCAGCTGGGAATT
CCTTGGATAAAATCAGAGGGTGAAGCAGAAGCAACATGTGCAGCACTGAATAGTGTTGGA
GTGGTTGATGGCTGTATGACAAATGACAGCGACACATTTTTGTATGGAGCAAAATCCGTT
TATCGAAATTTGTCAATGACAACAGATAGAAATGATATTGATGTTGAGTGTTACGAACTG
TGTGATATCGAATCTAAATTACAACTCAACAGGAAGTCTCTTATTGCCCTCGGACTTCTG
CTCGGTTGTGATTATTCACCACAAGGAGTTCCTGGAGTTGGCAAGAAACAAGCAATTATG
TTGTTATCCTCCTGGAAAAACATAGATCCTTTAGAAAAATTGAAAGCTTGGAAATCTGAA
AGTGTTTTAAGTCCTACTGTAACAAAGAAACCAACACATTGTTCTGCATGCAGCCATATA
GGTTCGAAACGTGATCATAAAAAAAACGGTTGTGACATTTGTGGTTCTGAATGTGGAAGT
GAAACAGCTTTACCAGTTGACTGTTCATGTGAATGGCATGTACTTGAAAATGAACAACGG
AAGCACAACTTGGAAAATGGAATAAAGAAAAAGGCTTTACTGGTGGAAAACTTTCCCGAC
CCGAAAATCATCCGAGAGTTCACTCGCAACAAACTTGGAAGTCAACCTTTAAACCACTTG
TCACCACGACAACCAACACTCTTTGGTGCGGTCCAGTATCTATGCGAAAAATTAGAATGG
CAAGTGAAATATGCAGTGGACAAAGTTCTACCTTTATTGACTTATTGGTTGATGCAAAAT
GAAGGAACAATCAATGAGATTTCTTTTCAACGCATCGTGCGTACTCGCATTAAAGACCGT
GTCCCGTCGTTCGAGGTGAAGTGGTTCCTGTCGGGAATTGATGACGTCACAGAGGCCGTC
ACGCTCGAGCCACAAGAGTTGGTGACGAAGAAGTTTCCAGAAGCTTCCAAAAATTTTTTC
GCTGAACAGCAAGCAAAGAAAAAGAAAACTAAATCGAAAGGTGCCAAACAACAGAAGATA
CCAGCTGCCAAAATGACAGACTTTTACAAAATAACAAAAACAACGGAATTAACGTCAAAA
CCTTTAATTACAAAAGGCAATGACCTGAAAAATACGTCAACAACGCCTACAGCTGCCAAC
ACGGCGGCAAAAAACTCAGAAATATCTCCCATTCAATCCGAATACGTTAAAAATGATCTT
AAACGAAGTTCCCGCCCAACTTCGTCGTGTACCGTGGTTAGCAAAAGCAATGACGACGAT
GACGTCATTTTTGTGAGCGAATCCAGCCCCGCAAAACAAGACCTTGATGTGTTGCACTTA
ATCGAATCTGTGGCGTCTTTCAAAATTACAAGCGATGAAAGTGAACCAGTGGCGTCTCCA
GTCTCAGTTAGCCAACAGACACTCCCATTCAGAGACCTTACCAATGCAAGAGAAACAGAG
ACGGCGACCAAAACCTGCGAACTTACTTTTCCAGACGAATCCTTTGACATTAATTTCTCT
CTAGGTGGTTTACACACACCCTGTAAAGCGACAAATCCGCACAGTGTAGACGACAGTTTT
GATCTTTTCTCAAGGTCGCCATTACAGCCTACTAGCACTGTGTCTAACGTGACCAAACCC
TCCCCTGCCAAAAGTCAAGTTTCGGCGTCACCCGTTACCCCGTGTATATTGCCACCGAAG
TCGCCCCCCAGTCCAGTGTTTATGACTCTGGCTGAACGGCTTCGACTGAGAGCATCAGGT
TCATCGAACTAATCTAAACATTTACGCAAAAACTTTTGCACTTTATATTAAATAACCTGC
TGATGCTGCTCGTCTGCAAAAGTTGATTTGTATGACAATTTCAACTTTGTTTATACGTAA
AATTAAAAG
| PANTHER |
XPG/Rad2 (IPR006084) - T[13-675] 1.7E-166 |
| SMART |
XPG_DNA_repair_N (IPR006085) - T[13-108] 2.0E-16 |
| Pfam |
XPG_DNA_repair_N (IPR006085) - T[13-107] 2.1E-12 |
| SUPERFAMILY |
PIN-like_dom_sf (IPR029060) - T[14-222] 8.83E-46 |
| PRINTS |
XPG/Rad2 (IPR006084) - T[36-50] 1.0E-18 - T[82-101] 1.0E-18 - T[133-150] 1.0E-18 - T[154-174] 1.0E-18 - T[212-227] 1.0E-18 |
| SMART |
XPG-I_dom (IPR006086) - T[134-207] 1.5E-17 |
| Pfam |
XPG-I_dom (IPR006086) - T[135-222] 3.7E-25 |
| SUPERFAMILY |
5-3_exonuclease_C_sf (IPR036279) - T[207-251] 5.38E-17 - T[332-403] 5.38E-17 |
| SMART |
HhH2 (IPR008918) - T[209-243] 0.0012 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FEN1_HUMAN | 27.969 % | 103 | 1.29E-23 |
| GEN_HUMAN | 40.702 % | 353 | 8.59E-110 |
| ERCC5_HUMAN | 38.356 % | 99 | 3.84E-21 |