- Transcript 'KH2012:KH.C2.520.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.520.v1.A.nonSL3-1
Possible name(s)
CWC22; NOM1
Gene model
Location
KhC2 [2,653,724 / 2,658,201]
Amino acid sequence
Length: 806
>KH.C2.520.v1.A.nonSL3-1
LSNCLLLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGYDKPSATLGRKE
RRRQMKKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGATKRKRKRAKLLE
KQEEFVREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIGQGETESGLNDL
KNETKNYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDASDEPDEEDLVE
EDEMGSDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGKYVPPALRRNMS
EKENEKRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAFVTEILTDVILVQFFTP
DPIPERLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLMQNYGKGKECNNIVQLL
CSLYQVRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQLRKDNPILLKEIVEKIT
KQSQELTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRRKKIKLLIKAESEILPD
VSFQDLVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSSQLIEAARKLRMNTDVR
RGIFYAIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQRSFNLFYYHLLNKFCL
YNREFIMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQALPLACLKTLEYTEMDKP
MVSFLRQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLFIQHFMLGDANFMKEHE
DIKDCLTNMDNKLVSSKQSSIFGGVC
Nucleotide sequence
Length: 2,535
>KH2012:KH.C2.520.v1.A.nonSL3-1
ATTATCGAATTGTTTATTACTTACTTCGGTATCTACAATTATAATGAGGAGACGAAACCA
TGATAAAGGCAAGATGAGGTTTAACACAATTGTAAAAAACGTGATAAGCGATTTTGGAGA
GGAGGCGAACGAAGGAAAGGATGGTTACGATAAACCCTCAGCGACTCTTGGTCGAAAAGA
ACGCAGAAGACAAATGAAAAAACAGCGTAAGAGTCGTCAAATGGAGCCTGTTGAGCACGT
TGTAGCGACAGAGCTGGTAAAATCACAGCCGCCTAAAAACCCCTTTAAAAAAACTAGACA
AAAACGAAAACCGGAAAGTGGGGCAACAAAACGGAAGCGAAAGCGAGCGAAACTTCTTGA
AAAACAAGAAGAGTTTGTGAGGGAAGACAATACTGAAGATGATAGGACAATCCAAAACAT
TGAAAAGTTGATGAAAATAAAGAAGAAAAAGACACTTCCATCAGCATTTGCAAGTGACGG
ATTGGATTTTCTACTTGATGTTATTGGACAAGGAGAAACTGAAAGCGGATTAAACGATCT
TAAAAATGAAACAAAGAACTATGAGGATGGTGATGTCATCCATCACAGTGATGGTCTTGA
TAGTGATGATGAGGAGGGGGACGATCAGGATGAAGATATCTTGGATGATGTTTTGTCAGA
TGTGCCGGAGGAGGATTTTGATGATGCGAGTGATGAACCAGATGAGGAGGATTTGGTTGA
AGAAGATGAGATGGGAAGTGATGCTGGTTGGGTGAATGAAGTTGAAAGTGAAGATGTTAG
TGAAGAAGAAGCATCTGTTATTGATGATGAAGAAAATAATGCTGTTGTTGTAAAACCAGT
TGAAACTGAGGAAAGTATCAGTGGAAAATATGTTCCACCTGCCTTGAGACGGAATATGTC
AGAAAAGGAAAACGAAAAACGAAGAAAACTTGAGCGGCAAATCAAAGGATGGTTGAACAG
ATTAAGTGAGTCAAATCTGGGAATGATTTGTTCTGAAATTTGTGCCATCTATCAAGTAAA
TAGTCGAGCGTTTGTAACTGAGATATTGACAGATGTAATATTGGTACAGTTTTTCACTCC
CGACCCAATACCAGAGCGACTTATAACAGAATCCTCAATGTTAATTGGTGTCCTTTGTCA
TAACATTGGTGTGGAGGTGGTGGCCCATTTTATTGAGGCAGCATGCAGAAAACTGGGCAA
AATTTTTTTGATGCAAAATTATGGAAAAGGAAAGGAATGTAACAACATTGTGCAACTTCT
CTGTAGTTTGTACCAAGTGCGAACTATGCAGACACAGATTGTTTTGGATTTAATAGAGAA
GTTTATTGTTGGTTTCACTGAAAAGGACATTGAACTTCTGGTGCTTGTGTTAAAAAATGT
TGGTTTTCAATTAAGAAAAGATAATCCTATTCTACTGAAAGAAATAGTGGAAAAAATTAC
CAAACAATCCCAAGAATTAACACAAGATAATTCTTCTAGAATGAAATACATGCTTGAGGT
TTTGACTGCGATTAAAAACAACAATGTTCGAAAAGTAACAGAATACGATGTAGAACTTTT
AAACAACAGAAGAAAGAAAATCAAACTTTTAATTAAAGCAGAATCAGAAATTTTGCCAGA
TGTATCATTTCAGGATCTGGTTGATGCGGAGACAAAAGGAAGATGGTGGATCGTGGGAAG
TTCATGGAAAGGAGTTCCGATGCTAAAGAAGTCAACGGAAACTACTGTAGAAGTTGACAC
CAACGTCAGTTCCCAGTTGATAGAAGCAGCTCGTAAATTAAGAATGAATACTGATGTTCG
TAGGGGAATATTTTACGCTATTATGTCAGCTGAGGATTACATGGATGCCTTTGAAAGAGT
GGTAAAGATGGGTTTAAAGGGAAAACAACTTCGTGAGATTAGTCATGTTGTTGTGGAATG
TTGTATTCAACAAAGATCATTCAACCTCTTCTATTATCATCTACTGAATAAATTCTGTCT
TTATAACAGAGAATTCATAATGACAACACAATGTACATTCTGGGATAAGTTTAAACTTCT
TGCCTCGTACAGTAAAATGCAACTTTCGAATCTATCAAGTTTAGTTTCAAGTTTGCTTCT
TTCGCAAGCACTTCCACTTGCATGTCTGAAGACACTTGAGTACACGGAAATGGACAAACC
AATGGTTTCATTTTTACGTCAGGTTTTAATTCGGATATCAAGATCAGAAAATGCAGATTC
TAAAATAAGTGAGATTTTCCCGAAACTTGGATCTAGCAAGCACTCCCTGGTTCGTCAAGG
ATTAAAACTTTTTATTCAACATTTTATGCTCGGTGATGCTAATTTCATGAAAGAACATGA
AGATATAAAAGACTGTTTAACAAACATGGATAATAAACTCGTGTCTTCAAAGCAATCATC
AATTTTTGGTGGAGTGTGTTAATACTGTTGTGAACTTGTGGTTACCGAATTTTTTGTTCT
GTTTTACAATTATGTGTTGGTATATGTATTACTATTATGTATTGGTCCAGTTTGATATAT
CTGGACTTTTGACAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[278-552] 8.9E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[301-509] 2.73E-23 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[311-508] 1.5E-9 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[312-508] 1.6E-12 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[598-714] 17.684 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[599-705] 3.6E-9 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[599-705] 5.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 41.604 % | 409 | 2.65E-130 |
