- Transcript 'KH2012:KH.C2.520.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.520.v1.A.ND1-1
Possible name(s)
CWC22; NOM1
Gene model
Location
KhC2 [2,653,629 / 2,658,201]
Amino acid sequence
Length: 822
>KH.C2.520.v1.A.ND1-1
YPLLQHNNNVVSILISLSNCLLLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANE
GKDGYDKPSATLGRKERRRQMKKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKP
ESGATKRKRKRAKLLEKQEEFVREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFL
LDVIGQGETESGLNDLKNETKNYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEE
DFDDASDEPDEEDLVEEDEMGSDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEE
SISGKYVPPALRRNMSEKENEKRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAF
VTEILTDVILVQFFTPDPIPERLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLM
QNYGKGKECNNIVQLLCSLYQVRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQL
RKDNPILLKEIVEKITKQSQELTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRR
KKIKLLIKAESEILPDVSFQDLVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSS
QLIEAARKLRMNTDVRRGIFYAIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQ
RSFNLFYYHLLNKFCLYNREFIMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQAL
PLACLKTLEYTEMDKPMVSFLRQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLF
IQHFMLGDANFMKEHEDIKDCLTNMDNKLVSSKQSSIFGGVC
Nucleotide sequence
Length: 2,630
>KH2012:KH.C2.520.v1.A.ND1-1
TCTGGTTTTAAGATCTTTGAGAAAAGATTGTGCACCACTGCAGGGTAATACCCTTTGTTA
CAGCACAATAACAACGTGGTTTCGATTCTTATATCATTATCGAATTGTTTATTACTTACT
TCGGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGATGAGGTTTAAC
ACAATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGGAAAGGATGGT
TACGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAATGAAAAAACAG
CGTAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCTGGTAAAATCA
CAGCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGAAAGTGGGGCA
ACAAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTTTGTGAGGGAA
GACAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAAAATAAAGAAG
AAAAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACTTGATGTTATT
GGACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAAGAACTATGAG
GATGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGAGGGGGACGAT
CAGGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGATTTTGATGAT
GCGAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGGAAGTGATGCT
GGTTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATCTGTTATTGAT
GATGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAGTATCAGTGGA
AAATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGAAAAACGAAGA
AAACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAAGTGAGTCAAATCTGGGAATG
ATTTGTTCTGAAATTTGTGCCATCTATCAAGTAAATAGTCGAGCGTTTGTAACTGAGATA
TTGACAGATGTAATATTGGTACAGTTTTTCACTCCCGACCCAATACCAGAGCGACTTATA
ACAGAATCCTCAATGTTAATTGGTGTCCTTTGTCATAACATTGGTGTGGAGGTGGTGGCC
CATTTTATTGAGGCAGCATGCAGAAAACTGGGCAAAATTTTTTTGATGCAAAATTATGGA
AAAGGAAAGGAATGTAACAACATTGTGCAACTTCTCTGTAGTTTGTACCAAGTGCGAACT
ATGCAGACACAGATTGTTTTGGATTTAATAGAGAAGTTTATTGTTGGTTTCACTGAAAAG
GACATTGAACTTCTGGTGCTTGTGTTAAAAAATGTTGGTTTTCAATTAAGAAAAGATAAT
CCTATTCTACTGAAAGAAATAGTGGAAAAAATTACCAAACAATCCCAAGAATTAACACAA
GATAATTCTTCTAGAATGAAATACATGCTTGAGGTTTTGACTGCGATTAAAAACAACAAT
GTTCGAAAAGTAACAGAATACGATGTAGAACTTTTAAACAACAGAAGAAAGAAAATCAAA
CTTTTAATTAAAGCAGAATCAGAAATTTTGCCAGATGTATCATTTCAGGATCTGGTTGAT
GCGGAGACAAAAGGAAGATGGTGGATCGTGGGAAGTTCATGGAAAGGAGTTCCGATGCTA
AAGAAGTCAACGGAAACTACTGTAGAAGTTGACACCAACGTCAGTTCCCAGTTGATAGAA
GCAGCTCGTAAATTAAGAATGAATACTGATGTTCGTAGGGGAATATTTTACGCTATTATG
TCAGCTGAGGATTACATGGATGCCTTTGAAAGAGTGGTAAAGATGGGTTTAAAGGGAAAA
CAACTTCGTGAGATTAGTCATGTTGTTGTGGAATGTTGTATTCAACAAAGATCATTCAAC
CTCTTCTATTATCATCTACTGAATAAATTCTGTCTTTATAACAGAGAATTCATAATGACA
ACACAATGTACATTCTGGGATAAGTTTAAACTTCTTGCCTCGTACAGTAAAATGCAACTT
TCGAATCTATCAAGTTTAGTTTCAAGTTTGCTTCTTTCGCAAGCACTTCCACTTGCATGT
CTGAAGACACTTGAGTACACGGAAATGGACAAACCAATGGTTTCATTTTTACGTCAGGTT
TTAATTCGGATATCAAGATCAGAAAATGCAGATTCTAAAATAAGTGAGATTTTCCCGAAA
CTTGGATCTAGCAAGCACTCCCTGGTTCGTCAAGGATTAAAACTTTTTATTCAACATTTT
ATGCTCGGTGATGCTAATTTCATGAAAGAACATGAAGATATAAAAGACTGTTTAACAAAC
ATGGATAATAAACTCGTGTCTTCAAAGCAATCATCAATTTTTGGTGGAGTGTGTTAATAC
TGTTGTGAACTTGTGGTTACCGAATTTTTTGTTCTGTTTTACAATTATGTGTTGGTATAT
GTATTACTATTATGTATTGGTCCAGTTTGATATATCTGGACTTTTGACAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[294-568] 9.3E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[317-525] 2.3E-23 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[327-524] 1.5E-9 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[328-524] 1.7E-12 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[614-730] 17.684 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[615-721] 5.5E-17 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[615-721] 3.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 41.604 % | 409 | 3.42E-130 |
