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TRANSCRIPT CARD

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  1. Molecular Tool 'Ci-Bra MO (Yamada 2003)'
  2. Molecular Tool 'Ci-Bra>Tbx2/3-VP16::GFP (José-Edwards 2013)'
  3. Transcript 'KH2012:KH.L18.13.v2....'
  4. Transcript 'KH2012:KH.C5.346.v2....'
  5. Transcript 'KH2012:KH.C2.217.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.217.v1.A.nonSL6-1

Possible name(s)

CNNM1; CNNM2; CNNM4

Location

KhC2 [1,694,799 / 1,697,157]

Sequences

Amino acid sequence

Length: 432

>KH.C2.217.v1.A.nonSL6-1
SIHPTMTENITCSLETGNLIICNGVTYKPEVVLTYHDKLFWIYLGIYVALVLIAGLMSGL
TMGLLSLDLMSLTVLSTDGKPNEQKHAKRILPLVKRHHLLLVTLLLSNAAAVESMPLFLD
KISNPITAIVVSVTAVLIFGEVVPQALCTRYGLAIGSTLSPLVYALMFITLPISWPLAKI
LDCVLGKEHTTFFRRAELSALVSLHRTEGQENEEPLTADEVTVIKGALAMRDKQVKQVCT
PMESVFSLDVNGVMDQTTMNLLLSKGHSRVPIYEGTPDNLIGLILVKNLIKIDPDANLPI
REVFEEHKRPLLKVPHSTGLFDVLNLFQLGKSHMFIVVRENESGNTAVATKLEPEDEVIG
LITLEDVMEELIQEEIVDETDVYVDVHRKIEVAKSRRQLLSTSSNKFARQNPKSNITDVN
VDSADDTQPLLR

Nucleotide sequence

Length: 1,917

>KH2012:KH.C2.217.v1.A.nonSL6-1
AAATTTGCACATTTACGTTTAAGGTTTGCTGTCGTCTGCTGTTTCTGCTCTGTGGTGGAT
CTTGTAAAGTATACATCCAACAATGACAGAAAATATTACTTGTTCTTTGGAGACTGGAAA
CCTAATCATTTGCAATGGAGTGACTTATAAACCTGAAGTAGTACTAACATATCATGATAA
ATTGTTCTGGATATATCTTGGCATTTATGTTGCGCTCGTTTTAATAGCTGGATTAATGAG
TGGTTTGACTATGGGACTTTTATCATTAGATTTAATGAGTTTAACAGTCTTGTCTACTGA
TGGAAAACCTAATGAACAGAAACACGCAAAGCGAATTTTACCTTTGGTTAAAAGACATCA
CCTGCTGTTAGTTACGTTACTGCTTTCTAATGCAGCAGCTGTGGAAAGTATGCCACTCTT
TCTTGACAAGATTTCAAATCCCATAACTGCTATTGTTGTATCAGTCACCGCTGTTTTAAT
ATTTGGAGAAGTTGTACCACAGGCTTTGTGCACCCGGTATGGTCTTGCAATTGGATCTAC
CTTATCTCCTCTTGTATATGCGCTGATGTTTATTACACTACCCATCTCATGGCCACTAGC
CAAAATTTTGGATTGTGTTCTGGGCAAAGAACATACCACCTTCTTTCGAAGAGCAGAGCT
AAGTGCACTGGTTTCTTTGCACAGAACTGAGGGACAAGAAAATGAAGAACCTTTAACTGC
AGATGAGGTCACTGTCATCAAAGGTGCACTTGCTATGAGAGATAAACAAGTAAAGCAAGT
GTGCACGCCAATGGAAAGCGTGTTTTCTTTAGATGTGAATGGTGTAATGGACCAAACCAC
CATGAATTTACTTTTGAGCAAAGGCCACTCCCGTGTACCAATCTATGAAGGCACCCCTGA
TAATTTAATCGGTCTAATCCTCGTCAAAAATTTAATTAAAATTGATCCTGATGCCAATTT
ACCAATCAGGGAAGTGTTCGAAGAGCACAAGCGTCCTTTGCTGAAAGTTCCACACTCCAC
AGGCCTCTTTGATGTTCTCAATTTATTCCAGCTTGGAAAAAGTCACATGTTTATTGTGGT
GAGAGAAAACGAAAGCGGCAACACTGCTGTGGCTACTAAGCTTGAACCTGAGGACGAAGT
AATTGGTTTGATTACCCTGGAAGATGTGATGGAGGAACTAATACAAGAAGAAATAGTTGA
TGAGACTGATGTGTATGTTGATGTGCATAGAAAAATTGAAGTTGCAAAATCTCGACGTCA
ATTGCTCTCCACTAGCTCCAATAAGTTTGCGCGTCAAAACCCAAAGTCAAACATCACTGA
TGTTAATGTGGATTCTGCAGATGATACACAACCTTTGTTGAGATAAATTATGTTTATTTT
TCCAATAATATGCAGATAAAAAAATCCGATATTAATATATATAACAGCTAACATGATTGT
ATTGTGCCCATATGTTTTTGTGTAAGAAACCAATAACCATGCACTGGAGGATAAAATCAT
CTAGAATTTTGGGTATATGGGGTCTGCAATCAAATATCATAAACTTAGTTTTAAATTACC
ACTAATTAATAATTAATATTTGTTATTTATATAGATATATTACAAATTAGAACAATGTTG
TTTTCTTCCTTCATTTCTGTTTAGTTTTAAATTAAATGTAGTGCATGGTTATTATACACA
GGGGTCTAAATTCATGGTGTAGATTTTATAGGTTCCATGAAAACAGACTTTATATCAACT
TTACATTTCCAAAAAGATTCACTGTACCACTGTTGCTAAGTTGGATTTTTCTTGTTTGTT
TTACTTTATTCTTCACTATCTTTGTTGTCAAATTAAGTGAGGCTTAAAATCAAATGCAGC
AACTTGTTGGCAAATCATGAACTTGATTATTAGTTCATTATATTTTATTTAACCTAG

InterProScan

Pfam
DUF21 (IPR002550) - T[46-212] 7.8E-35
ProSiteProfiles
CBS_dom (IPR000644) - T[239-300] 7.552 - T[307-379] 9.646
Pfam
CBS_dom (IPR000644) - T[309-371] 0.0032

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNNM2_HUMAN 38.251 % 255 7.53E-77
CNNM4_HUMAN 33.702 % 233 3.45E-69
CNNM1_HUMAN 34.67 % 172 8.4E-47