Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.176.v1.A.ND1-1

Possible name(s)

CNTRL; DRC3; LRMDA

Gene model

KH2012:KH.C2.176

Location

KhC2 [7,644,815 / 7,646,373]

Sequences

Amino acid sequence

Length: 240

>KH.C2.176.v1.A.ND1-1
ERFGMDNDEDRLSDGEKDEIIEDDADSYSYTGHTNCHSVPEFLVLQAKQFRQLNLSHNGI
NDLKNIAIFVNLEILNLDNNEISDSTLFPVLPKLHSLTLNNNKIKYLQIFISRLAKHCIS
LTYLSLLGNEACPHEILDSNKTEKDYEKYRIFVASRLPKLKFLDWKPISNQEREEGAEAF
PITPRDRYPSIKTQESCQGLPKIAEEPQAVVKPASFYGHVRYRYGGKQSEGNRFIRNNDL

Nucleotide sequence

Length: 1,558

>KH2012:KH.C2.176.v1.A.ND1-1
AAACTCTTTGTTTTTAACAACAAATCGATTTTCGTAGTAAAATAAAAAGAACGGTTTTTG
TGATACAGTAGACTTCTGTATAGCTGTATAGGTTCTTTTCACTCGCTGTTCATTCATAAA
ACTGAAGGATAGGAACGTTTTGGCATGGATAATGATGAAGACAGACTTTCCGATGGCGAA
AAGGATGAAATAATTGAGGACGACGCCGACAGTTATTCTTACACCGGCCATACAAATTGT
CATTCTGTGCCCGAGTTTTTGGTGCTACAAGCGAAGCAGTTTAGACAGCTGAATTTGAGC
CACAATGGAATTAACGATCTCAAAAATATCGCAATCTTTGTCAATTTGGAGATTCTTAAT
TTGGATAATAATGAAATATCAGACTCAACTCTTTTTCCTGTTCTGCCGAAACTGCACTCT
TTAACTCTGAATAACAACAAGATAAAATATCTACAAATTTTTATTTCACGTCTTGCAAAA
CACTGCATTTCTTTGACGTACTTAAGTTTGCTTGGTAATGAAGCTTGTCCTCATGAAATA
CTAGATTCAAATAAAACTGAAAAAGATTATGAAAAATACCGCATTTTTGTGGCAAGCCGG
CTACCAAAGCTTAAATTTCTCGACTGGAAGCCCATTTCTAATCAGGAAAGAGAAGAAGGA
GCGGAAGCGTTCCCAATTACACCAAGAGACAGATACCCTTCAATTAAAACCCAAGAGTCT
TGCCAGGGTTTACCTAAAATAGCTGAAGAGCCACAAGCGGTAGTCAAACCAGCCAGCTTT
TATGGCCATGTAAGATACAGATATGGTGGAAAACAATCGGAGGGAAACCGGTTCATCAGA
AACAATGATCTTTAAAAGATTTTTCTTTAAATATTTATACAGTCAATTTTACCAAATCAG
ACCTCTTCTAGACCTAGCCAAACTGATGTGGTTAATGTTAAACGGTTGGTCTGATTTAAT
GTTGGCCGATCAAGTGGGATTGACTTTACCATGTTTGACAATGGGAGTTTATTAACAAGA
ATGAATTAATCCAACATAATTATAATCTGGACCAAGCCAATCTGGTTCAACTGAATGTCG
ATTAAGCGAGTTTGACCGTAAAAGGTGTATAAAATCTGAAGCTAGAATGGCGAGGAATAA
AAAAGTATTTCTACACTGTAACCTGATGTAATTTATATTGTTTTGTATTATTGTGTTTCA
TATACTCATATACTGTTAATGTTTACATTAAATCAGTTAACCAGTGTAATATTACTGTAA
CAATTAATTCCAGGTGCAATTTTTATTCAAGTGCAATTCTACTTTTGTTTTAGTACTTAT
GTGTTTGATAAAATTGTACAATATTACGTTTTTCAAGTGACTTGTTTTATTTTTACGTAG
TTATATCAGTTGTTCTTAATGTTTAAAAGGAAACCTTCCATTTTTTTAAAGCCATAACCA
TAAGACTCTAAAACAATTATTATACATTGCCCTATTTCTTTAAAAAATGCTAATTAATTT
TGGTAATTTTAATTACATCTATTTTTACCATTGCAAACTAAAAGAATATTTATTTTAG

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[28-183] 8.6E-26
ProSiteProfiles	Leu-rich_rpt (IPR001611) - T[49-70] 6.803 - T[71-92] 7.704 - T[93-114] 6.372

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LRMDA_HUMAN	40.659 %	133	8.48E-39