- Clone 'cilv051i17' >
- Clone 'cima864602' >
- Clone 'AHC0AAA260YP15' >
- Transcript 'KH2012:KH.C2.123.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.123.v1.A.ND1-1
Possible name(s)
CALM1; EFCAB3; SPATA21
Gene model
Location
KhC2 [6,170,434 / 6,174,131]
Amino acid sequence
Length: 406
>KH.C2.123.v1.A.ND1-1
ITNEMDLVPGKTKVRKQASVCKNHTVDVFSSRPQTKQVKFPQIEKNGANGKPEMTLDPTR
LSSASKLLTKKQQCAFFEAFEFFDHRRNGRISSEEFVETLRRVGVPVNEKVVYDLIVAQD
ENGNGEMDFEEYLNFMTNEDIFMSLIGGNQEPGKPDDKDVLMYQVMSKFIKRSELSESQR
MEIVGYYTRKLRKAAKKHILMHAAHVVHHYANGARSLGLTEKEIFNQIETIKQLAQNEGD
EKKKNSPYAHPIQLILTPISITKSNRNKLTQPGWNTPQISAYGVRLPRINVSESKTFENV
HDIRKKVETVKEDYYWDLSKAQRKNFNSLLKDLHIRNIPTNRLQTMMKGIFDVYTASRLT
GCRGRHGVTAKTNSGKKDFYSSRSHLKAPHNSTTQSSKPRFVSAGI
Nucleotide sequence
Length: 1,459
>KH2012:KH.C2.123.v1.A.ND1-1
AAGTTTGTTTTGTTATTAAAGACATAATGGAAATATTTGGGGTTTTCCGGGCTGTAAAAT
ACGGTAAATAAATCTTTCGTATCATTAAAACCGCATAGTTTTTGTTTCATTTTTTGGGCA
TATCGCCAACTCTGAGCATATGCTGCCTTGAATTACGAACGAGATGGATTTAGTGCCCGG
CAAAACGAAAGTTCGTAAGCAAGCTTCGGTTTGCAAGAATCACACAGTTGATGTGTTTTC
TAGCAGACCACAAACAAAACAAGTGAAGTTTCCTCAAATTGAGAAAAATGGAGCAAACGG
GAAACCTGAGATGACTTTGGATCCAACCCGATTAAGTTCAGCGAGTAAACTACTCACGAA
GAAACAACAATGTGCTTTCTTCGAAGCGTTTGAATTTTTTGATCATCGTCGAAACGGTCG
AATCAGCAGTGAGGAATTCGTTGAAACGCTTCGTCGAGTAGGAGTTCCCGTCAACGAGAA
AGTGGTTTATGACCTCATAGTTGCTCAGGATGAGAATGGAAATGGAGAAATGGATTTTGA
GGAATATTTGAACTTTATGACGAATGAAGATATTTTTATGTCACTTATCGGTGGGAACCA
GGAACCTGGAAAACCTGATGATAAAGATGTTCTCATGTATCAGGTGATGTCTAAGTTCAT
CAAACGTAGCGAACTCTCTGAATCACAAAGGATGGAAATTGTTGGATATTATACAAGGAA
GTTGAGAAAAGCTGCCAAGAAGCATATCCTCATGCACGCTGCCCATGTCGTGCATCATTA
TGCTAATGGTGCTAGATCACTTGGTTTGACAGAGAAAGAGATTTTTAATCAGATCGAAAC
AATTAAGCAACTCGCACAAAATGAAGGAGATGAGAAAAAGAAGAACAGTCCGTACGCTCA
TCCTATTCAACTTATTTTGACACCAATATCCATCACAAAGTCAAATCGAAACAAGTTAAC
ACAGCCTGGTTGGAACACACCACAGATATCAGCTTATGGTGTTCGGCTGCCTAGGATTAA
TGTATCAGAATCAAAAACCTTTGAAAACGTTCACGATATTCGGAAAAAAGTAGAAACTGT
TAAGGAGGATTATTACTGGGATCTCTCAAAAGCTCAGCGTAAAAACTTTAATTCTTTGTT
AAAAGACCTTCATATTCGAAACATACCAACAAACAGACTTCAAACTATGATGAAAGGAAT
ATTTGATGTTTATACTGCAAGTAGATTAACTGGTTGCCGAGGAAGACATGGTGTTACAGC
GAAAACCAATTCCGGAAAAAAGGATTTTTACAGCAGTCGTAGTCACCTTAAAGCTCCACA
TAACAGCACTACCCAATCCTCCAAACCAAGATTTGTCAGCGCTGGCATTTAACTTGTTCC
AAAAATATTTTCATTTTTATTTATTTTTTTTTTTTTTTCATAAAATAAATCGAATAAAAT
CGCCGGGGAGTAAAACATA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[60-166] 2.49E-15 |
| SMART |
EF_hand_dom (IPR002048) - T[75-103] 1.2 - T[111-139] 1.4 |
| Pfam |
EF_hand_dom (IPR002048) - T[76-136] 1.6E-8 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[78-106] 10.218 - T[107-142] 9.855 |
| CDD |
EF_hand_dom (IPR002048) - T[88-137] 2.16244E-7 |
| ProSitePatterns |
S100/CaBP-9k_CS (IPR001751) - T[115-136] . |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[120-132] . |
| Protein Name | Identity | Bit Score | e-value |
|---|