Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.947.v1.A.SL1-1

Possible name(s)

NAPG

Gene model

KH2012:KH.C1.947

Location

KhC1 [6,537,725 / 6,539,215]

Sequences

Amino acid sequence

Length: 347

>KH.C1.947.v1.A.SL1-1
IIKKMTSEADRLVQEGEKHLKTGFFKWRPDFDSAADCFQKAGLAYKKHKNLEKAVSAFLK
VADCYYKNGSRFHSGKAREEAGLVYKDMKDFENALKCLDHASELYLEDGTPDTAAMCLDR
GGKMVEMTHPAWAASSYLKGAEIYENEDKSRLRSAAELVGKAARIQVRMNKLSEAVKTIE
HEKQLYSQVDGGDHGAGSRLTCAMVLVHLHIGDQVHAEQSVYDACENIDGFNESEEYDAL
MGLVEAYDQRDQDAASRILNTPLFKYMDTAYAKLARSLKVPGYVPGNAVKTESNSHKPRH
NLDDMTKQADEMADKFASLQSSVPNPHQSNQTPQSSSAVEEEEFDLC

Nucleotide sequence

Length: 1,490

>KH2012:KH.C1.947.v1.A.SL1-1
GTTTATAGTAGATTAGATTATAAAGAAGATGACTTCTGAAGCTGATCGTTTGGTACAAGA
GGGTGAAAAGCATTTGAAGACTGGTTTCTTTAAATGGCGACCAGATTTCGACAGTGCAGC
AGACTGTTTTCAAAAAGCTGGACTTGCATACAAGAAACACAAGAATTTGGAAAAAGCTGT
CTCGGCTTTCCTTAAGGTAGCAGATTGCTATTACAAGAATGGATCACGTTTTCATTCAGG
TAAGGCTCGTGAAGAAGCGGGTTTGGTATATAAAGACATGAAAGACTTTGAAAATGCTTT
AAAGTGTCTAGACCATGCATCTGAGCTTTACTTGGAAGATGGTACACCTGATACAGCAGC
AATGTGCTTGGATAGGGGTGGTAAAATGGTGGAAATGACCCACCCAGCATGGGCGGCTTC
TTCTTACTTAAAAGGTGCTGAAATATATGAAAATGAGGACAAAAGTAGACTTCGATCTGC
TGCTGAACTTGTGGGTAAAGCAGCTCGGATTCAGGTACGAATGAATAAACTTAGTGAAGC
TGTAAAAACTATTGAACATGAAAAGCAGCTGTATAGTCAAGTGGATGGTGGAGATCATGG
GGCAGGAAGCAGGTTGACCTGCGCTATGGTGCTCGTACATTTGCATATAGGTGACCAGGT
ACATGCGGAACAGAGTGTGTATGATGCATGTGAAAATATTGATGGCTTTAATGAGAGCGA
GGAATACGATGCATTGATGGGACTCGTGGAAGCTTATGATCAGCGGGACCAGGATGCAGC
ATCACGAATCTTAAATACTCCACTGTTTAAGTATATGGACACTGCTTATGCAAAGTTAGC
TAGATCATTAAAAGTTCCCGGTTACGTGCCAGGCAACGCCGTAAAAACAGAGAGTAATTC
TCACAAACCCAGACATAATCTGGACGATATGACCAAACAAGCGGATGAAATGGCTGATAA
ATTTGCATCTCTGCAATCTTCTGTACCAAATCCACACCAAAGTAATCAAACTCCACAATC
CTCTTCTGCTGTTGAAGAGGAAGAATTTGATCTCTGTTAATTAAACTTAACAGTATTGTT
TTTGATTTAAAAAGAAAAACATGGGATTGTGCAATTGTGAGAGTTGTATATTTGTTAATG
TGTTCCACCATACCCGTTTTAATTGAAAAAAGTCTTGGTAAATAAAAAATTCTGTGTTTT
TTACCATGCGGTTTACCCAAACATCATGACCAAATAAAGTAAATGTCTATATTGTCATTT
TTGTAGCAATTTATGGTGGTGCCTGAATAAAAGCATGATCGACTGCTGTCTACATGTTAA
TATTTATCAGAATTTGTTGCTTTTATTATACAATGTGTCAACTAATTATAAATATTTTAT
TTACTGTGTGCTTTACTGGTACAGTACAAGTATAAAAATGTGAATTAAACATTACCGTAT
GTTTGTAGCATATTAAACATGTTATGTTGTAATTGCTTATACATTTTCAG

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[2-281] 2.4E-65
PANTHER	NSF_attach (IPR000744) - T[6-347] 3.9E-88
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[7-255] 1.79E-39
SMART	TPR_repeat (IPR019734) - T[35-68] 17.0 - T[75-108] 8.0

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNAG_HUMAN	44.118 %	222	1.17E-70