Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.875.v1.A.SL1-1

Possible name(s)

SURF1

Gene model

KH2012:KH.C1.875

Location

KhC1 [1,111,228 / 1,112,462]

Sequences

Amino acid sequence

Length: 298

>KH.C1.875.v1.A.SL1-1
NANNYCVNKFKVKMLRQKIYAMLIFANKASTTTKVSFSNSAKNLQSINPRQYSKNRTQDP
TGKWLMLAFPASAFGLGVWQWRRKAWKSNLIKELEQKTTAEPILFPTDLSELQNLEYRPL
IVRGTFDHSKELYIEPRSLIDRSKNKPIDAGSVMSIQNKNMGVLVITPFHVTDHDITILV
NRGFVPKEQKNPKARMSGQIEKEIEIVGLLRHNEKRPPLSPKNNPVRNHWFYKDLDQMGS
LTGAEPILLDAVFESSVPGGPIGGQTRVSLRDEHLSYMITWFSLSAITSYMWYMRFLK

Nucleotide sequence

Length: 1,234

>KH2012:KH.C1.875.v1.A.SL1-1
GAATGCTAACAACTATTGTGTGAATAAATTTAAAGTAAAAATGTTGAGACAGAAAATATA
TGCCATGCTTATTTTTGCCAACAAAGCTTCCACAACAACAAAGGTTTCGTTTTCCAACTC
GGCTAAAAATCTTCAGTCAATAAATCCACGACAATATTCTAAAAATAGAACCCAAGATCC
AACAGGAAAGTGGCTAATGCTCGCATTCCCTGCTAGTGCCTTTGGGTTGGGGGTTTGGCA
ATGGAGAAGAAAGGCTTGGAAAAGTAATTTAATTAAAGAACTGGAACAAAAAACCACAGC
AGAGCCCATTCTGTTTCCCACTGACTTAAGCGAGCTTCAGAATTTGGAATATCGTCCGTT
AATTGTCCGTGGAACATTCGACCACTCAAAGGAATTATACATTGAGCCAAGATCTTTGAT
TGACAGGTCAAAAAATAAACCAATTGATGCGGGGTCCGTGATGTCAATACAGAACAAGAA
CATGGGTGTGTTGGTAATCACACCATTCCATGTTACAGACCATGATATAACAATCTTAGT
TAACAGAGGATTTGTACCAAAGGAGCAAAAAAATCCAAAGGCGAGAATGTCAGGGCAAAT
AGAGAAGGAAATCGAAATAGTTGGCTTGCTTCGACATAATGAAAAACGACCACCTTTGTC
TCCAAAAAACAACCCCGTTCGTAACCACTGGTTTTATAAAGACCTTGATCAAATGGGTTC
CTTAACTGGTGCTGAACCTATATTACTAGATGCTGTGTTTGAATCCTCAGTACCTGGTGG
TCCCATAGGAGGCCAAACCCGTGTCAGTTTGAGAGATGAACATTTATCTTACATGATAAC
TTGGTTTTCTTTATCTGCTATCACATCGTATATGTGGTACATGAGGTTTCTCAAATAATG
ATTTTTTCCATAATTTGTTTATGCATAATATAGGCCTATCGTTGCTATTTTATTCAAGGA
AAGTGCATTACATTTTTCAAATATAGGCGCCAAACCTGGGGTGGCAGGGTGGACAGGTCT
ACCCTAAAGTTTCCTGCACTGCATTAGTCAGTAAACATCAGAACCAATAAGTTAAAGTAG
CTAGAAATGTGTATCCAACTATCTTTGTGTCCTCTAGCATAAAAGGATTGGTGCCTATGA
ATATGCATATATGCTAAATAAGTAAAATTATCATTGCAAAAATGAACAACTTTATTATGT
TGCTACATTTAAACACTCTAAATATCCTTTTTAG

InterProScan

ProSiteProfiles	Surf1/Shy1 (IPR002994) - T[61-298] 41.154
Pfam	Surf1/Shy1 (IPR002994) - T[70-286] 2.2E-39
CDD	Surf1/Shy1 (IPR002994) - T[74-291] 4.8554E-70

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SURF1_HUMAN	55.085 %	295	6.24E-100