Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.875.v1.A.nonSL3-1

Possible name(s)

SURF1

Gene model

KH2012:KH.C1.875

Location

KhC1 [1,111,228 / 1,112,122]

Sequences

Amino acid sequence

Length: 185

>KH.C1.875.v1.A.nonSL3-1
NLEYRPLIVRGTFDHSKELYIEPRSLIDRSKNKPIDAGSVMSIQNKNMGVLVITPFHVTD
HDITILVNRGFVPKEQKNPKARMSGQIEKEIEIVGLLRHNEKRPPLSPKNNPVRNHWFYK
DLDQMGSLTGAEPILLDAVFESSVPGGPIGGQTRVSLRDEHLSYMITWFSLSAITSYMWY
MRFLK

Nucleotide sequence

Length: 894

>KH2012:KH.C1.875.v1.A.nonSL3-1
AATTTGGAATATCGTCCGTTAATTGTCCGTGGAACATTCGACCACTCAAAGGAATTATAC
ATTGAGCCAAGATCTTTGATTGACAGGTCAAAAAATAAACCAATTGATGCGGGGTCCGTG
ATGTCAATACAGAACAAGAACATGGGTGTGTTGGTAATCACACCATTCCATGTTACAGAC
CATGATATAACAATCTTAGTTAACAGAGGATTTGTACCAAAGGAGCAAAAAAATCCAAAG
GCGAGAATGTCAGGGCAAATAGAGAAGGAAATCGAAATAGTTGGCTTGCTTCGACATAAT
GAAAAACGACCACCTTTGTCTCCAAAAAACAACCCCGTTCGTAACCACTGGTTTTATAAA
GACCTTGATCAAATGGGTTCCTTAACTGGTGCTGAACCTATATTACTAGATGCTGTGTTT
GAATCCTCAGTACCTGGTGGTCCCATAGGAGGCCAAACCCGTGTCAGTTTGAGAGATGAA
CATTTATCTTACATGATAACTTGGTTTTCTTTATCTGCTATCACATCGTATATGTGGTAC
ATGAGGTTTCTCAAATAATGATTTTTTCCATAATTTGTTTATGCATAATATAGGCCTATC
GTTGCTATTTTATTCAAGGAAAGTGCATTACATTTTTCAAATATAGGCGCCAAACCTGGG
GTGGCAGGGTGGACAGGTCTACCCTAAAGTTTCCTGCACTGCATTAGTCAGTAAACATCA
GAACCAATAAGTTAAAGTAGCTAGAAATGTGTATCCAACTATCTTTGTGTCCTCTAGCAT
AAAAGGATTGGTGCCTATGAATATGCATATATGCTAAATAAGTAAAATTATCATTGCAAA
AATGAACAACTTTATTATGTTGCTACATTTAAACACTCTAAATATCCTTTTTAG

InterProScan

ProSiteProfiles	Surf1/Shy1 (IPR002994) - T[1-185] 33.129
CDD	Surf1/Shy1 (IPR002994) - T[1-178] 1.23027E-53
Pfam	Surf1/Shy1 (IPR002994) - T[2-173] 1.7E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SURF1_HUMAN	56.216 %	236	1.33E-78