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TRANSCRIPT CARD

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  1. Clone 'cien133699'
  2. Clone 'cinc034a06'
  3. Clone 'BW570026'
  4. Clone 'ciad008m15'
  5. Transcript 'KH2012:KH.C1.875.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.875.v1.A.nonSL2-1

Possible name(s)

SURF1

Location

KhC1 [1,111,228 / 1,112,120]

Sequences

Amino acid sequence

Length: 184

>KH.C1.875.v1.A.nonSL2-1
LEYRPLIVRGTFDHSKELYIEPRSLIDRSKNKPIDAGSVMSIQNKNMGVLVITPFHVTDH
DITILVNRGFVPKEQKNPKARMSGQIEKEIEIVGLLRHNEKRPPLSPKNNPVRNHWFYKD
LDQMGSLTGAEPILLDAVFESSVPGGPIGGQTRVSLRDEHLSYMITWFSLSAITSYMWYM
RFLK

Nucleotide sequence

Length: 892

>KH2012:KH.C1.875.v1.A.nonSL2-1
TTTGGAATATCGTCCGTTAATTGTCCGTGGAACATTCGACCACTCAAAGGAATTATACAT
TGAGCCAAGATCTTTGATTGACAGGTCAAAAAATAAACCAATTGATGCGGGGTCCGTGAT
GTCAATACAGAACAAGAACATGGGTGTGTTGGTAATCACACCATTCCATGTTACAGACCA
TGATATAACAATCTTAGTTAACAGAGGATTTGTACCAAAGGAGCAAAAAAATCCAAAGGC
GAGAATGTCAGGGCAAATAGAGAAGGAAATCGAAATAGTTGGCTTGCTTCGACATAATGA
AAAACGACCACCTTTGTCTCCAAAAAACAACCCCGTTCGTAACCACTGGTTTTATAAAGA
CCTTGATCAAATGGGTTCCTTAACTGGTGCTGAACCTATATTACTAGATGCTGTGTTTGA
ATCCTCAGTACCTGGTGGTCCCATAGGAGGCCAAACCCGTGTCAGTTTGAGAGATGAACA
TTTATCTTACATGATAACTTGGTTTTCTTTATCTGCTATCACATCGTATATGTGGTACAT
GAGGTTTCTCAAATAATGATTTTTTCCATAATTTGTTTATGCATAATATAGGCCTATCGT
TGCTATTTTATTCAAGGAAAGTGCATTACATTTTTCAAATATAGGCGCCAAACCTGGGGT
GGCAGGGTGGACAGGTCTACCCTAAAGTTTCCTGCACTGCATTAGTCAGTAAACATCAGA
ACCAATAAGTTAAAGTAGCTAGAAATGTGTATCCAACTATCTTTGTGTCCTCTAGCATAA
AAGGATTGGTGCCTATGAATATGCATATATGCTAAATAAGTAAAATTATCATTGCAAAAA
TGAACAACTTTATTATGTTGCTACATTTAAACACTCTAAATATCCTTTTTAG

InterProScan

CDD
Surf1/Shy1 (IPR002994) - T[1-177] 1.36685E-53
ProSiteProfiles
Surf1/Shy1 (IPR002994) - T[1-184] 32.984
Pfam
Surf1/Shy1 (IPR002994) - T[2-172] 2.6E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SURF1_HUMAN 55.978 % 233 1.05E-77