Aniseed - Transcript Card

Transcript 'KH2012:KH.C14.487.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.487.v1.A.ND1-1

Possible name(s)

MRPL21

Gene model

KH2012:KH.C14.487

Location

KhC14 [2,951,296 / 2,954,412]

Sequences

Amino acid sequence

Length: 223

>KH.C14.487.v1.A.ND1-1
NFVNSMKRSLEKVAGLLYRTSLLTVPHRSKFNSNLVRTVQTNVKLHHRPICIYSHVSQRN
LYEPLPEATVEHVPTFYDQYVFPQPPDVISEEEHTVVIRKVNECIAEAQNQRLFAVVVYG
AKHYKVTDLDLIQTTGYIDAEPGEKIRLEKVLLVGGKDFTIVGRPILKRSLAKVEAVVVE
KTPGAQKIIQRYIKKKNFQRKYVYTPVHTVLRITRVEAYPGIE

Nucleotide sequence

Length: 1,024

>KH2012:KH.C14.487.v1.A.ND1-1
CATCAATTCTGTCAACGTTTCTGTTATTTCCTGTCCAGTTTTACATAGCTAGAACTTTGT
AAACAGTATGAAGCGATCGTTAGAAAAGGTGGCTGGTCTGTTATACAGAACGTCTCTTTT
AACTGTACCGCATCGAAGCAAATTTAACTCAAACCTCGTGCGAACTGTTCAGACAAATGT
AAAGTTACATCACAGACCTATCTGCATTTATTCTCATGTAAGCCAGCGGAATCTCTACGA
GCCTTTACCTGAGGCTACAGTCGAACATGTTCCAACTTTTTATGATCAATATGTTTTCCC
ACAACCTCCAGATGTTATATCAGAAGAAGAACATACAGTTGTAATACGTAAAGTAAATGA
ATGCATTGCTGAAGCTCAAAACCAACGATTGTTTGCTGTGGTTGTGTATGGGGCCAAACA
TTACAAAGTGACAGACCTTGATTTAATTCAAACTACTGGTTATATAGACGCAGAACCTGG
GGAGAAAATACGACTTGAAAAGGTTTTACTTGTTGGTGGAAAAGATTTCACAATTGTTGG
TCGTCCGATATTGAAACGTAGTTTGGCGAAAGTAGAAGCGGTTGTGGTGGAAAAAACTCC
AGGAGCTCAAAAAATAATTCAACGTTATATTAAAAAGAAAAATTTTCAAAGAAAATACGT
TTATACACCTGTGCATACTGTGCTGAGAATAACTCGTGTAGAAGCATATCCGGGCATTGA
ATGAGTGGACCTTGACTTCTCATATCTATTCATTCTTCAGCATCAAATCGTTGAACTTCA
CTCTTTAAAATGTGGCCATAATTTTACTTGCTGTGAACAACCAACTGTAAAATTTTTGGA
CATTTTTGCCTTTCTAAGTTAGTTAAACAAGAAAGAGGAAAAGGATTTTTGTGCTAAACC
AATCAAACACCACCTTCTGGACTTTGTTTTATCACTTTAATATCAAGCTGCTCCTTCATA
TTGATAATCTGTTTCATGCCTTTTTATAGCAGATAATTATTTCTGACTTGAATTTTGTTT
GTAG

InterProScan

PANTHER	L21p-like (IPR028909) - T[83-218] 2.1E-37
SUPERFAMILY	L21-like_sf (IPR036164) - T[113-216] 1.96E-20
Pfam	L21p-like (IPR028909) - T[114-215] 2.9E-20
TIGRFAM	Ribosomal_L21 (IPR001787) - T[114-216] 1.7E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM21_HUMAN	43.373 %	111	1.24E-30