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TRANSCRIPT CARD

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  1. Region 'REG00000207' > 
  2. Transcript 'KH2012:KH.C1.1051.v3...' > 
  3. Transcript 'KH2012:KH.L152.2.v1....' > 
  4. Molecular Tool 'En>HA::SoxB1 (Stolfi 2011)' > 
  5. Transcript 'KH2012:KH.C14.456.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.456.v1.C.ND1-1

Possible name(s)

RPAIN

Gene model

KH2012:KH.C14.456

Location

KhC14 [3,583,217 / 3,584,488]

Sequences

Amino acid sequence

Length: 223

>KH.C14.456.v1.C.ND1-1
SIMSHPVTPDSVAKRKAMYKVGSPASGGAWKETYKRRCAERFHKSRSKLLDKYRNIVIDE
TTEEDSLETVMNQELQKMQEECLTPFTGPITFEDVVKTMEEIKQELLEWEAELIFQSENQ
QMKIEVENHEAIIENGENQVICPICCVNHLEVQINHLKCRCGVNINLRQDAITLSHVKQS
LEEGVTSHFNNCHCKPSFKVKTKFLQTNLILTCLACDFMYIVV

Nucleotide sequence

Length: 1,271

>KH2012:KH.C14.456.v1.C.ND1-1
AATTTTTTTTAATTGTTACCATTGGAAAGGTAAAATACGAAAATTGATCCATCATGTCTC
ACCCTGTTACTCCAGATTCCGTCGCAAAACGTAAAGCAATGTACAAGGTTGGCTCTCCTG
CATCCGGAGGCGCGTGGAAGGAGACATATAAGCGAAGATGTGCGGAAAGATTTCATAAGA
GCAGGTCCAAACTACTTGACAAATACCGAAATATTGTAATTGACGAAACCACTGAAGAAG
ACTCCTTAGAAACTGTTATGAACCAGGAGCTTCAAAAGATGCAGGAAGAGTGTTTGACTC
CTTTCACCGGACCTATAACATTTGAAGATGTCGTTAAAACAATGGAAGAAATTAAGCAGG
AGCTTCTTGAATGGGAGGCTGAACTCATCTTTCAATCTGAGAATCAACAAATGAAAATTG
AAGTTGAAAACCATGAAGCTATCATAGAAAACGGGGAGAACCAAGTCATTTGCCCTATAT
GTTGTGTAAATCACCTTGAAGTGCAAATAAACCATTTAAAATGCAGATGTGGTGTAAACA
TCAACTTGCGACAAGATGCCATTACTCTTTCTCATGTTAAACAGAGCTTGGAGGAAGGCG
TAACCTCTCACTTTAACAACTGTCACTGCAAGCCTTCATTCAAAGTCAAAACAAAGTTCC
TCCAAACAAATCTGATTTTGACTTGTCTTGCATGTGATTTCATGTACATTGTGGTTTAGG
CTTAATACTGTGCATACTCTTCAACAGAACTGTAACCATATATATATATATATATATATG
GGAATTTTTCAGCAAGTATAAAATCGAGGACCCAGACAGTCAAAATGTTATTTGCGACGT
TAGTTCTTTTAATATACCTCTTCAAAGCATGCTGTTATCATGCTAACCTATAAAATCTAA
GTAACTGGTCATTTTAAAATAGTTGCTTAGTACTATAACAAACCGAATGTGCTTTAGTAA
CATTATCCATTGAATCTGAATTGTTTTTGCTATCTTGCCATAAAATGCTGTTCTGATTTT
CCTATTATTATGTGTGTTTCAATTTTTTTTTGTTGAGCACAAAATCATTTTTTATACAAC
TATCAGTTTAAATGCAGTAATAATAGTTGGAACTTCTATTTCGGGTATAGCAGGTACTGC
ACCTATCGAAAAAGGCCAATATGTTATTGGGTATGCCCACATTTTATAGCCAAACGCCCT
AACCAATCGTTTTTCAACAGAATCAAAAAAGTATAGTAAAGTTTTTTCATAGGTTTTGTT
ATCAACATTTT

InterProScan

PANTHER
RIP (IPR028156) - T[9-223] 2.3E-47
Pfam
RPA_interact_N_dom (IPR028158) - T[15-55] 4.2E-9
Pfam
RPA_interact_C_dom (IPR028159) - T[141-220] 1.2E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIP_HUMAN 28.44 % 87 4.6E-21