- Transcript 'KH2012:KH.S404.1.v2....' >
- Transcript 'KH2012:KH.S404.1.v3....' >
- Transcript 'KH2012:KH.L154.44.v1...' >
- Transcript 'KH2012:KH.C14.230.v4...'
Transcript Model
Transcript Id
KH2012:KH.C14.230.v4.A.SL3-1
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
KhC14 [27,544 / 41,909]
Amino acid sequence
Length: 683
>KH.C14.230.v4.A.SL3-1
GGEGDCNKRETRGKREKCSSSKSSNSAASSSSSDSSSDTKNMTRSRRLSDKPADSVGDTD
INSVFSIGRITRGQMNRLKQISSESLNFELSGSVRLKNSKKSVVAGSSSDQTRKFVMKRK
HELDSEKSPEKKACKSIHGRSIVATRTAILPLASPVPHKAVTRTTSTRRTRLVSDGSNSD
APPVESNGMITAPTTPTKVNQTPPGNNEWLQRFLQWNARDKIQVLENLIGVCQPHEVRHM
LEVIEPQFQRDFISLLPKELALYVLSFLQPQDLLIAAQTCKFWRILSEDNLMWREKCLEE
GISEPYMTKIMRNNWKSKRSVGCGSTWKASFLRHARIEANWRSGNTKTPKLLKGHDDHVI
TCLQFNGSRIVSGSDDNTLKVWSAISGKCLRTLTGHTGGVWASQMRKNLIISGSTDRTLK
IWNADTGLCVHTLYGHTSTVRCLALHDNIVVSGSRDATLRAWNIDTGECTHCLVGHMAAV
RCVCYDGERVVSGAYDYMVKVWDPETEECLHTLQGHTNRVYSLQFDGHYVVSGSLDTSIK
VWEIERGTCLHTLMGHQSLTSGMELRDNILVSGNADSTVKVWDILTGECLKTLEGSNKHH
SAVTCLQFYGKFVITSSDDGTVKLWDVKTGKVVRDLVTLDSRGSGGVVWRIRASQTKLVC
AVGSRNGTEETKLLVLDFDSEPK
Nucleotide sequence
Length: 2,367
>KH2012:KH.C14.230.v4.A.SL3-1
GTGGAGGTGAAGGTGATTGTAACAAAAGGGAAACTCGGGGGAAACGAGAAAAATGTTCGT
CCTCCAAAAGTTCCAACTCAGCTGCTTCTTCAAGCTCCTCTGATTCAAGTTCTGATACAA
AAAACATGACCCGAAGTAGACGACTGTCAGATAAACCTGCAGACTCGGTCGGGGACACCG
ACATCAACTCTGTGTTTTCAATCGGACGTATAACGCGTGGGCAAATGAATCGCTTGAAAC
AAATATCTTCAGAGAGTTTAAACTTCGAACTGAGCGGCTCTGTTCGGTTAAAAAACTCAA
AGAAATCTGTTGTTGCTGGAAGTTCTTCAGATCAAACCAGGAAATTTGTGATGAAAAGAA
AGCATGAACTGGATTCAGAGAAATCACCTGAAAAGAAAGCGTGCAAGTCAATACATGGCA
GAAGTATCGTTGCAACACGAACCGCCATCCTTCCACTTGCGTCACCCGTTCCACACAAAG
CTGTTACAAGAACAACTTCAACACGGAGAACCAGACTTGTATCAGATGGGAGTAACAGTG
ATGCTCCGCCTGTGGAAAGCAATGGGATGATCACAGCACCAACCACGCCAACCAAAGTTA
ACCAAACACCACCTGGTAATAATGAATGGTTGCAAAGGTTCCTGCAGTGGAATGCCCGCG
ACAAGATCCAAGTGTTGGAGAATTTGATCGGCGTGTGTCAACCACATGAAGTTAGACATA
TGTTGGAAGTTATTGAACCTCAGTTTCAACGAGATTTTATTTCACTTTTACCCAAGGAGC
TTGCGCTCTATGTCCTGAGCTTCCTCCAACCACAAGATCTTCTAATCGCCGCTCAAACTT
GTAAATTCTGGAGGATTTTGTCTGAAGATAATTTAATGTGGAGAGAGAAGTGTTTGGAGG
AAGGGATCAGCGAACCTTACATGACGAAGATTATGAGGAATAATTGGAAATCCAAACGCA
GCGTTGGTTGTGGAAGTACGTGGAAAGCTTCGTTCTTACGCCATGCAAGGATTGAAGCGA
ACTGGAGAAGCGGGAACACTAAAACACCAAAGTTACTAAAGGGTCACGACGATCACGTGA
TAACTTGTCTTCAATTTAACGGCTCACGAATCGTGAGTGGATCTGATGACAATACACTTA
AAGTTTGGTCAGCTATTTCTGGAAAGTGCCTTCGAACACTTACCGGCCACACAGGGGGGG
TGTGGGCTTCACAGATGAGGAAGAATCTCATTATAAGCGGGTCAACCGATCGAACGTTGA
AAATATGGAATGCAGATACTGGTCTTTGTGTCCACACATTATATGGTCATACATCAACTG
TAAGATGCTTAGCACTTCATGATAATATCGTTGTTAGTGGTTCACGTGACGCAACATTGC
GTGCTTGGAACATTGACACGGGTGAATGCACGCATTGTCTTGTGGGTCACATGGCAGCCG
TTCGTTGCGTTTGTTACGACGGGGAACGAGTTGTATCGGGGGCTTACGATTACATGGTGA
AAGTCTGGGATCCAGAGACGGAGGAATGTCTGCATACTTTACAAGGACACACTAATCGTG
TCTACTCACTTCAGTTCGACGGCCATTATGTTGTAAGTGGAAGCCTCGATACTTCTATCA
AAGTTTGGGAGATTGAGCGAGGAACTTGTTTACATACGTTGATGGGACATCAGTCGTTAA
CATCAGGGATGGAACTACGGGATAATATATTAGTGTCGGGTAACGCTGATTCAACCGTGA
AAGTTTGGGATATTTTAACTGGGGAATGCTTGAAGACTTTGGAAGGTTCAAATAAACATC
ACAGCGCGGTTACTTGCCTTCAATTCTACGGGAAATTTGTGATTACGAGTTCTGATGATG
GAACTGTTAAGTTATGGGATGTTAAAACTGGGAAGGTTGTTCGAGACTTAGTTACGTTAG
ATTCTCGTGGTTCCGGTGGCGTGGTGTGGCGGATACGAGCGTCGCAAACTAAACTTGTGT
GTGCGGTGGGTAGCAGGAACGGGACTGAAGAAACCAAACTACTTGTGCTCGATTTTGACT
CAGAACCAAAATAACGTTTCAACTTCAAACGTGACGTGTGAAAATCATCGCATGTAGAAC
TCAAGCGTGTTATTTCCATGCTTTAAAACGCGTGTCAATATTAAGATTTTTTTATTTCTC
AATTTTTATACCTCATCACCCATTCTTGCTGATGCGTTTTAAAAAACGTCTTGAAAACTA
TTCGTTTTAGCGTCTTGGACGAATGTTCGGTTTATTCCATTTGTGCTTCCAACTGTACTA
GAGTGCATGGTATCATCAGCTTATTCATCGTTGCGATATGGTTTGTTTACCGTTGGCTTT
GTGCAGTAAATGTCAAAAAAATTGCGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[236-336] 3.66E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[250-296] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[254-298] 1.0E-9 |
| SMART |
F-box_dom (IPR001810) - T[256-296] 3.1E-6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[344-668] 1.83E-94 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[345-683] 6.7E-122 |
| SMART |
WD40_repeat (IPR001680) - T[345-383] 3.7E-5 - T[386-423] 2.7E-7 - T[426-463] 1.1E-7 - T[466-503] 7.8E-6 - T[506-543] 6.9E-9 - T[546-583] 0.0011 - T[586-626] 9.2E-7 - T[629-677] 280.0 |
| Pfam |
WD40_repeat (IPR001680) - T[352-383] 5.2E-6 - T[387-423] 1.3E-5 - T[429-463] 4.3E-4 - T[467-503] 6.1E-5 - T[508-542] 2.6E-7 - T[547-583] 0.019 - T[587-626] 1.6E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[352-635] 64.62 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[366-392] 10.341 - T[393-432] 11.945 - T[433-472] 13.282 - T[473-512] 11.678 - T[513-552] 14.519 - T[553-592] 12.647 - T[596-635] 13.282 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[410-424] 1.3E-8 - T[570-584] 1.3E-8 - T[613-627] 1.3E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[410-424] . - T[450-464] . - T[530-544] . - T[570-584] . - T[613-627] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 74.12 % | 763 | 0 |
| FBW1A_HUMAN | 32.294 % | 234 | 3.16E-68 |
| FBW1B_HUMAN | 31.839 % | 234 | 8.89E-69 |