- Molecular Tool 'cicl31l16-MO (Hamada's MO)' >
- Clone 'AHC0AAA197YD11' >
- Molecular Tool 'FoxB-MO (Imai's 25mer MO)' >
- Transcript 'KH2012:KH.C14.230.v3...'
Transcript Model
Transcript Id
KH2012:KH.C14.230.v3.A.SL5-1
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
KhC14 [30,589 / 41,909]
Amino acid sequence
Length: 596
>KH.C14.230.v3.A.SL5-1
LWFIYGTAMRESKKLRVINGVTHRLRYSQMKRKHELDSEKSPEKKACKSIHGRSIVATRT
AILPLASPVPHKAVTRTTSTRRTRLVSDGSNSDAPPVESNGMITAPTTPTKVNQTPPGNN
EWLQRFLQWNARDKIQVLENLIGVCQPHEVRHMLEVIEPQFQRDFISLLPKELALYVLSF
LQPQDLLIAAQTCKFWRILSEDNLMWREKCLEEGISEPYMTKIMRNNWKSKRSVGCGSTW
KASFLRHARIEANWRSGNTKTPKLLKGHDDHVITCLQFNGSRIVSGSDDNTLKVWSAISG
KCLRTLTGHTGGVWASQMRKNLIISGSTDRTLKIWNADTGLCVHTLYGHTSTVRCLALHD
NIVVSGSRDATLRAWNIDTGECTHCLVGHMAAVRCVCYDGERVVSGAYDYMVKVWDPETE
ECLHTLQGHTNRVYSLQFDGHYVVSGSLDTSIKVWEIERGTCLHTLMGHQSLTSGMELRD
NILVSGNADSTVKVWDILTGECLKTLEGSNKHHSAVTCLQFYGKFVITSSDDGTVKLWDV
KTGKVVRDLVTLDSRGSGGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDSEPK
Nucleotide sequence
Length: 2,127
>KH2012:KH.C14.230.v3.A.SL5-1
ATAAGGGTGTTTAGGCTTAGTAGCTGTGGTTCATATATGGGACTGCCATGAGGGAAAGTA
AAAAACTACGTGTTATAAATGGAGTGACACATAGGCTTCGGTATTCACAGATGAAAAGAA
AGCATGAACTGGATTCAGAGAAATCACCTGAAAAGAAAGCGTGCAAGTCAATACATGGCA
GAAGTATCGTTGCAACACGAACCGCCATCCTTCCACTTGCGTCACCCGTTCCACACAAAG
CTGTTACAAGAACAACTTCAACACGGAGAACCAGACTTGTATCAGATGGGAGTAACAGTG
ATGCTCCGCCTGTGGAAAGCAATGGGATGATCACAGCACCAACCACGCCAACCAAAGTTA
ACCAAACACCACCTGGTAATAATGAATGGTTGCAAAGGTTCCTGCAGTGGAATGCCCGCG
ACAAGATCCAAGTGTTGGAGAATTTGATCGGCGTGTGTCAACCACATGAAGTTAGACATA
TGTTGGAAGTTATTGAACCTCAGTTTCAACGAGATTTTATTTCACTTTTACCCAAGGAGC
TTGCGCTCTATGTCCTGAGCTTCCTCCAACCACAAGATCTTCTAATCGCCGCTCAAACTT
GTAAATTCTGGAGGATTTTGTCTGAAGATAATTTAATGTGGAGAGAGAAGTGTTTGGAGG
AAGGGATCAGCGAACCTTACATGACGAAGATTATGAGGAATAATTGGAAATCCAAACGCA
GCGTTGGTTGTGGAAGTACGTGGAAAGCTTCGTTCTTACGCCATGCAAGGATTGAAGCGA
ACTGGAGAAGCGGGAACACTAAAACACCAAAGTTACTAAAGGGTCACGACGATCACGTGA
TAACTTGTCTTCAATTTAACGGCTCACGAATCGTGAGTGGATCTGATGACAATACACTTA
AAGTTTGGTCAGCTATTTCTGGAAAGTGCCTTCGAACACTTACCGGCCACACAGGGGGGG
TGTGGGCTTCACAGATGAGGAAGAATCTCATTATAAGCGGGTCAACCGATCGAACGTTGA
AAATATGGAATGCAGATACTGGTCTTTGTGTCCACACATTATATGGTCATACATCAACTG
TAAGATGCTTAGCACTTCATGATAATATCGTTGTTAGTGGTTCACGTGACGCAACATTGC
GTGCTTGGAACATTGACACGGGTGAATGCACGCATTGTCTTGTGGGTCACATGGCAGCCG
TTCGTTGCGTTTGTTACGACGGGGAACGAGTTGTATCGGGGGCTTACGATTACATGGTGA
AAGTCTGGGATCCAGAGACGGAGGAATGTCTGCATACTTTACAAGGACACACTAATCGTG
TCTACTCACTTCAGTTCGACGGCCATTATGTTGTAAGTGGAAGCCTCGATACTTCTATCA
AAGTTTGGGAGATTGAGCGAGGAACTTGTTTACATACGTTGATGGGACATCAGTCGTTAA
CATCAGGGATGGAACTACGGGATAATATATTAGTGTCGGGTAACGCTGATTCAACCGTGA
AAGTTTGGGATATTTTAACTGGGGAATGCTTGAAGACTTTGGAAGGTTCAAATAAACATC
ACAGCGCGGTTACTTGCCTTCAATTCTACGGGAAATTTGTGATTACGAGTTCTGATGATG
GAACTGTTAAGTTATGGGATGTTAAAACTGGGAAGGTTGTTCGAGACTTAGTTACGTTAG
ATTCTCGTGGTTCCGGTGGCGTGGTGTGGCGGATACGAGCGTCGCAAACTAAACTTGTGT
GTGCGGTGGGTAGCAGGAACGGGACTGAAGAAACCAAACTACTTGTGCTCGATTTTGACT
CAGAACCAAAATAACGTTTCAACTTCAAACGTGACGTGTGAAAATCATCGCATGTAGAAC
TCAAGCGTGTTATTTCCATGCTTTAAAACGCGTGTCAATATTAAGATTTTTTTATTTCTC
AATTTTTATACCTCATCACCCATTCTTGCTGATGCGTTTTAAAAAACGTCTTGAAAACTA
TTCGTTTTAGCGTCTTGGACGAATGTTCGGTTTATTCCATTTGTGCTTCCAACTGTACTA
GAGTGCATGGTATCATCAGCTTATTCATCGTTGCGATATGGTTTGTTTACCGTTGGCTTT
GTGCAGTAAATGTCAAAAAAATTGCGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[149-249] 3.01E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[163-209] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[167-211] 8.4E-10 |
| SMART |
F-box_dom (IPR001810) - T[169-209] 3.1E-6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[257-581] 1.28E-94 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[258-596] 4.7E-122 |
| SMART |
WD40_repeat (IPR001680) - T[258-296] 3.7E-5 - T[299-336] 2.7E-7 - T[339-376] 1.1E-7 - T[379-416] 7.8E-6 - T[419-456] 6.9E-9 - T[459-496] 0.0011 - T[499-539] 9.2E-7 - T[542-590] 280.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[265-548] 64.62 |
| Pfam |
WD40_repeat (IPR001680) - T[265-296] 4.4E-6 - T[300-336] 1.1E-5 - T[342-376] 3.6E-4 - T[380-416] 5.2E-5 - T[421-455] 2.2E-7 - T[460-496] 0.016 - T[500-539] 1.3E-7 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[279-305] 10.341 - T[306-345] 11.945 - T[346-385] 13.282 - T[386-425] 11.678 - T[426-465] 14.519 - T[466-505] 12.647 - T[509-548] 13.282 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[323-337] 8.7E-9 - T[483-497] 8.7E-9 - T[526-540] 8.7E-9 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[323-337] . - T[363-377] . - T[443-457] . - T[483-497] . - T[526-540] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 73.663 % | 756 | 0 |
| FBW1A_HUMAN | 32.366 % | 233 | 7.76E-69 |
| FBW1B_HUMAN | 31.839 % | 234 | 1.62E-69 |