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  1. Transcript 'KH2012:KH.C8.163.v4....' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Boleac.CG.SB_v3.S170...' > 
  4. Region 'REG00000485' > 
  5. Transcript 'KH2012:KH.C1.309.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.309.v1.A.SL1-1

Possible name(s)

SNF8

Gene model

KH2012:KH.C1.309

Location

KhC1 [1,360,345 / 1,361,427]

Sequences

Amino acid sequence

Length: 250

>KH.C1.309.v1.A.SL1-1
IKMRRRGVGASAITKKKLEAVRYKEHGNELAMIQLDQLSGQLETFHSHLEKFAANHKQEI
RKNPQFRRQFQQMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQLVEICITTRPQNGGI
IAITELHQKLMKTRGKYAQDVSIDDVRTALSKLKLLGTGFTLLGTGLKQIVKSVPGELNM
DHSAILELAQKSNGKVSHADVKSVYNWQPERVQDVLEHLTKEGMAWVDTQTPNKETWYWF
PALFGVGNNK

Nucleotide sequence

Length: 1,082

>KH2012:KH.C1.309.v1.A.SL1-1
GAGATATTTTTAAGAGCATCAGTGTGCAATGTGTATGTAAAGTTTTACCGTATAAATATA
AATCAAAATGCGTCGCAGAGGGGTTGGAGCAAGTGCCATCACTAAGAAGAAGTTAGAAGC
AGTGAGATACAAGGAGCATGGCAATGAACTTGCTATGATACAACTTGACCAACTAAGTGG
GCAACTGGAGACTTTTCATTCTCACTTGGAAAAGTTTGCTGCAAACCATAAGCAGGAGAT
TCGTAAAAATCCGCAATTTCGTCGCCAGTTCCAACAGATGTGCGCGACTATTGGTGTGGA
TCCTTTGGCATCGGGTAAAGGATTCTGGTCAGAGATGTTGGGGGTTGGAGACTTCTATTA
TGAACTTGGAGTGCAGTTAGTAGAAATTTGCATCACAACACGGCCACAAAATGGAGGAAT
TATCGCTATTACTGAGCTGCATCAAAAACTGATGAAAACGAGAGGAAAATACGCTCAAGA
TGTTTCTATAGATGATGTAAGAACAGCACTGTCAAAATTGAAACTGCTTGGAACCGGTTT
CACCCTGTTGGGAACCGGTTTAAAGCAGATTGTAAAGTCTGTGCCAGGGGAACTTAACAT
GGACCACTCAGCTATTTTAGAACTTGCGCAGAAGAGCAATGGAAAAGTTTCTCATGCAGA
TGTAAAGTCTGTGTATAACTGGCAACCTGAACGTGTTCAAGATGTATTAGAACATCTAAC
TAAGGAAGGAATGGCTTGGGTTGATACACAGACACCAAACAAAGAAACTTGGTATTGGTT
CCCAGCTTTATTTGGTGTTGGGAATAATAAATAGGAATATAACCATGTCTTATTGTACTT
GTATTATGTTCGATTTAAATTTTCAGAAAATGTAATATCATTGTCTTACAAGCGATTTAG
CGAATTGCATTTTATTTGTCACTTCTGGTTTATTTCATCATGTATTGCTTGGCCTATTGT
TTTTGTTAGTATAGCAATTATGTCCGTAAGTCATTCTAAAGTGCTATATTATATAAAGGT
CTTATATGAAACATTAATAATGAAGTATATGCTTTATAATTCTATTTCTTTTCTTGTTTC
AG

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[3-245] 3.6E-97
PIRSF
ESCRT-2_cplx_Snf8 (IPR016689) - T[3-249] 3.1E-92
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[26-177] 7.62E-47 - T[178-244] 6.19E-15
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[94-174] 5.0E-28 - T[175-249] 1.8E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 61.157 % 313 8.69E-109