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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L149.21.v2...' > 
  2. Transcript 'KH2012:KH.C1.309.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.309.v1.A.nonSL2-1

Possible name(s)

SNF8

Gene model

KH2012:KH.C1.309

Location

KhC1 [1,360,812 / 1,361,427]

Sequences

Amino acid sequence

Length: 114

>KH.C1.309.v1.A.nonSL2-1
YAQDVSIDDVRTALSKLKLLGTGFTLLGTGLKQIVKSVPGELNMDHSAILELAQKSNGKV
SHADVKSVYNWQPERVQDVLEHLTKEGMAWVDTQTPNKETWYWFPALFGVGNNK

Nucleotide sequence

Length: 615

>KH2012:KH.C1.309.v1.A.nonSL2-1
AATACGCTCAAGATGTTTCTATAGATGATGTAAGAACAGCACTGTCAAAATTGAAACTGC
TTGGAACCGGTTTCACCCTGTTGGGAACCGGTTTAAAGCAGATTGTAAAGTCTGTGCCAG
GGGAACTTAACATGGACCACTCAGCTATTTTAGAACTTGCGCAGAAGAGCAATGGAAAAG
TTTCTCATGCAGATGTAAAGTCTGTGTATAACTGGCAACCTGAACGTGTTCAAGATGTAT
TAGAACATCTAACTAAGGAAGGAATGGCTTGGGTTGATACACAGACACCAAACAAAGAAA
CTTGGTATTGGTTCCCAGCTTTATTTGGTGTTGGGAATAATAAATAGGAATATAACCATG
TCTTATTGTACTTGTATTATGTTCGATTTAAATTTTCAGAAAATGTAATATCATTGTCTT
ACAAGCGATTTAGCGAATTGCATTTTATTTGTCACTTCTGGTTTATTTCATCATGTATTG
CTTGGCCTATTGTTTTTGTTAGTATAGCAATTATGTCCGTAAGTCATTCTAAAGTGCTAT
ATTATATAAAGGTCTTATATGAAACATTAATAATGAAGTATATGCTTTATAATTCTATTT
CTTTTCTTGTTTCAG

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[4-109] 2.7E-34
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[39-113] 2.7E-25
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[42-108] 1.36E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 52.778 % 119 9.74E-35