- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C12.212.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.212.v1.A.SL1-1
Possible name(s)
DNA2; IGHMBP2; UPF1
Gene model
Location
KhC12 [3,685,561 / 3,696,935]
Amino acid sequence
Length: 1,337
>KH.C12.212.v1.A.SL1-1
EIRKILINLDLRMNKKTKSGKLSRSQGNILSFCSTRTAEDLLRSKDGLKQGKIDPFMKSK
NSPGFYLKSKRKTETSSSEMSSSPAKRTKVLSNIEEKNIISQDAELVEIASVSSCGSSQY
CTAPECTSDIENSPCLENCNNTSENGSKHPTRYSPVLHKPLKRKQQKIKEKEKDENVITE
AQQEDVGLKTKPIPNKQLSEEKAVFCTKESSHKTSTKETNPNTQLSTEKAIFCPKKSPCI
TPATARNATSMSCITKEVDPSKEVATNDYEWEDDLDLLKAFEEEETSTSESKVNTSFENE
LHYLRHKVVDVSSSHEGGFLTKTITVENTKSKQQHQVILKHEWAESNLDSGDIINLVPNQ
ESAEPCTVIDGKTNLLVHHPDTLISGTTVSNSLGCLRRAVLSERFKNTEIATDPNNVSSV
MLVGTIVHYIFQTAIKLKPPVAKEILLNVAKDAVYSRKYFADMLAMNTDPKAVLTQVENY
LPQIESWIKDFRVGKPCAGNTVNFQLPTSAAPNRFKPVRGSTLRYDANVALTEVKDIEEN
VWSPRYGLKGKIDLTGNFKITDKKTRTTENTVLPLELKTGKDSHSMEHHVQVSIYTMFCN
ERRNKHGVPLISLPAGLLLYLKNLKTSCVPLKPVDSSGLMMLRNKVAHSITKTIMKSNAN
SFEEFSTQSFPPTIDNDRTCRNCSQLRNCALVYKTVDESQGRYRPSSELFIMMSQLFSHL
TDADLAYFRHWMTCTFLEEQAANKKDKQKRFWLKTPQERFDEGKCITGLKLGGSSVPKPE
LADMFVQAFKRSDNGKENMFKVGDLVLVNGNEPSHIAIATGTIHSINKSFISIITDRDFS
GYDSDMIYSIDNHIWLGAISTQSSLSNLSLLMSNETQCNKLRHLIIMHRDPFFAKNLDFI
PRSSKNEIAQMLRGLNKTQRQAIKRVLISKDYTLVVGMPGSGKTTTIVAMIRILLLCGLR
VLVTSYTHSAVDNLLLKLIKYKTRFLRLGRPNQVHPNVLPYTEAVLSQNLKSPTELQKLY
DEYRVVGCTCLSVTSHIFFAIPGQNRPIFDVCIVDEASQIAQPACLAPLFHSERFVLVGD
HLQLPPLVVSQEAKKMGADESLFRRLTSHKPALCELTLQYRMNKEIMALSNHVTYEGRLE
CAHPTVAEATVKLDNYDLVKSMLPDTDIEWLLRTIDPKTSVIFLDTSKREAYESEVEHGI
QNMYEATIVTTIAQWLIKAGCSPSKIGIIAPFRKQLRAIEEKMNSIEENTTLVEINTVDK
YQGRDKSVILLSFVRSKKEPLAEKKGELLNDWRRLNVGITRAKHKLVMVGCTRSLLEYEP
CKKIIEYVQSNSLLHFI
Nucleotide sequence
Length: 4,382
>KH2012:KH.C12.212.v1.A.SL1-1
AGCAACTATTTGAAATCCAACGTCTACATTTTATGGTTTTTAAGTTTTAAGATTGAGAAA
TCAGAAAAATATTAATAAACCTAGATCTGAGAATGAACAAAAAGACAAAATCTGGCAAGT
TAAGTCGAAGTCAAGGAAATATTCTTTCTTTTTGTTCAACTCGTACTGCAGAAGATTTGC
TTAGAAGCAAAGATGGTTTAAAACAAGGAAAAATTGATCCTTTTATGAAGAGTAAGAACT
CCCCAGGTTTTTACCTCAAATCGAAACGGAAAACCGAAACATCATCAAGTGAAATGTCCA
GCAGTCCTGCCAAGAGGACAAAAGTTCTTTCAAATATAGAGGAGAAAAATATCATCTCTC
AAGATGCAGAACTGGTGGAAATAGCTTCTGTTAGTTCTTGTGGGTCGTCTCAATATTGTA
CAGCACCAGAATGCACAAGTGACATAGAAAATTCACCATGTTTGGAAAACTGCAACAATA
CTTCTGAAAATGGTTCAAAACATCCAACTAGATACAGTCCAGTTCTGCACAAGCCTTTAA
AAAGAAAACAACAGAAAATAAAAGAAAAAGAAAAGGATGAAAATGTAATTACAGAAGCTC
AGCAAGAAGATGTTGGTTTAAAAACAAAACCGATTCCAAATAAACAGCTATCCGAAGAAA
AAGCTGTTTTTTGCACAAAAGAATCTTCACACAAAACCTCCACTAAAGAAACAAATCCAA
ATACACAACTATCCACAGAAAAGGCCATTTTTTGTCCAAAAAAATCTCCATGCATTACCC
CAGCAACAGCGAGGAATGCAACTTCAATGAGCTGTATAACCAAAGAGGTCGATCCATCTA
AAGAAGTTGCCACTAATGATTATGAATGGGAGGATGATCTTGATTTATTGAAAGCATTTG
AGGAAGAGGAAACATCTACAAGTGAAAGCAAGGTTAACACAAGTTTTGAAAATGAACTTC
ATTACTTGAGGCATAAAGTTGTGGATGTGTCGTCTTCTCATGAAGGGGGGTTTCTCACAA
AGACAATTACAGTTGAGAATACAAAAAGTAAACAACAACACCAAGTGATACTTAAACATG
AATGGGCAGAAAGCAACCTTGATTCAGGTGATATTATAAACCTTGTTCCCAACCAAGAGT
CTGCTGAACCATGTACAGTTATTGATGGTAAAACTAACTTATTGGTTCACCACCCCGACA
CACTTATAAGTGGTACAACCGTGTCAAACAGTCTTGGGTGTCTCCGCAGAGCTGTTCTAT
CTGAACGTTTTAAGAACACTGAAATTGCTACAGACCCCAATAATGTTAGTTCAGTCATGT
TGGTTGGGACAATTGTCCATTATATATTCCAAACTGCTATCAAGTTAAAACCTCCAGTTG
CAAAGGAAATATTGTTAAATGTTGCAAAGGATGCCGTGTATTCTAGGAAATACTTTGCTG
ATATGCTTGCAATGAACACAGATCCCAAAGCAGTGTTGACCCAAGTAGAAAACTACCTTC
CCCAAATTGAATCTTGGATTAAAGATTTCAGGGTTGGCAAGCCATGTGCTGGCAACACTG
TCAACTTCCAGTTACCGACTTCAGCTGCTCCAAACCGGTTCAAACCAGTTAGGGGATCAA
CATTAAGATATGATGCAAATGTTGCACTGACAGAGGTAAAAGACATAGAAGAGAATGTAT
GGTCACCCAGGTATGGACTTAAGGGCAAAATAGATCTTACTGGCAATTTTAAAATCACTG
ACAAGAAAACTCGAACCACTGAAAATACCGTTTTGCCCCTTGAACTAAAAACGGGGAAAG
ATAGTCATTCCATGGAACATCATGTACAGGTTTCAATATACACCATGTTTTGCAACGAAA
GAAGAAACAAACATGGTGTCCCACTCATATCACTACCAGCAGGACTTCTTCTTTATCTGA
AAAACCTCAAAACAAGTTGTGTTCCACTTAAACCAGTGGACAGTAGTGGTTTAATGATGC
TGAGAAATAAGGTTGCTCACTCCATCACAAAAACCATCATGAAAAGCAACGCCAACTCTT
TTGAGGAATTTTCCACTCAATCTTTCCCACCAACAATTGATAATGACCGAACATGCAGGA
ACTGTTCACAACTACGTAACTGTGCACTTGTATATAAAACCGTTGACGAATCACAAGGGA
GATACCGACCCTCATCCGAGTTGTTCATTATGATGAGTCAGCTTTTCAGCCACCTCACGG
ATGCTGACTTAGCATATTTTCGCCACTGGATGACTTGCACTTTTTTGGAGGAGCAAGCTG
CAAATAAAAAGGATAAACAAAAACGATTTTGGCTAAAAACTCCACAAGAAAGATTTGACG
AGGGCAAATGCATCACCGGTCTAAAACTAGGGGGATCCTCGGTACCCAAACCAGAGCTGG
CTGACATGTTCGTTCAAGCTTTTAAAAGATCAGATAACGGAAAAGAAAATATGTTCAAAG
TTGGTGACTTAGTGTTGGTGAATGGAAATGAACCAAGTCATATTGCCATTGCTACTGGGA
CCATTCATTCTATCAACAAGTCATTTATTTCCATTATTACTGACAGAGATTTTTCCGGCT
ACGATTCTGACATGATCTACAGTATTGACAACCATATTTGGTTGGGAGCAATATCCACCC
AAAGTTCGTTAAGTAACTTGTCTCTGCTCATGTCGAATGAAACTCAATGCAACAAACTGA
GGCACTTGATCATTATGCATAGGGATCCATTTTTTGCCAAAAACTTGGATTTTATTCCCC
GTTCTTCTAAAAATGAGATTGCTCAGATGCTTAGGGGGTTAAATAAAACACAGAGACAAG
CTATTAAGAGGGTGCTTATATCTAAGGATTATACACTTGTTGTTGGTATGCCTGGCAGTG
GTAAAACAACCACTATCGTTGCTATGATCAGGATATTGCTTTTATGTGGTTTACGAGTAC
TAGTAACCTCATACACTCACTCTGCTGTTGATAATCTTTTACTCAAACTTATAAAGTATA
AGACCAGGTTTTTACGTTTGGGTCGGCCAAACCAAGTTCACCCCAATGTCCTGCCATACA
CTGAAGCGGTTTTGTCACAAAACCTAAAATCACCCACAGAACTTCAGAAACTATATGATG
AATATCGTGTAGTGGGTTGCACATGCTTGTCCGTCACCTCACACATATTTTTTGCCATCC
CGGGGCAAAATCGACCAATTTTTGACGTTTGTATCGTGGACGAAGCATCCCAGATTGCGC
AACCTGCCTGCCTAGCTCCTCTCTTTCACTCGGAACGTTTCGTTCTTGTTGGAGACCATC
TGCAACTTCCACCACTTGTAGTCAGCCAAGAGGCAAAGAAAATGGGAGCTGATGAGAGTC
TGTTCAGAAGACTAACTTCACACAAACCGGCTCTGTGTGAACTTACACTGCAATATAGAA
TGAACAAGGAGATCATGGCATTAAGCAACCATGTAACTTACGAGGGAAGGCTTGAGTGTG
CGCATCCTACAGTGGCTGAAGCGACAGTTAAACTCGATAATTATGACTTGGTAAAAAGCA
TGTTGCCCGATACTGACATCGAGTGGCTGTTACGTACTATTGATCCGAAGACGTCGGTAA
TATTTCTAGATACATCTAAGAGAGAGGCATATGAATCAGAAGTTGAACACGGTATACAGA
ACATGTATGAAGCCACCATTGTAACTACTATAGCTCAGTGGCTGATTAAGGCAGGTTGCT
CACCAAGTAAAATTGGAATTATTGCTCCGTTTCGTAAACAGCTGCGGGCAATTGAGGAAA
AAATGAATTCAATTGAAGAAAACACGACATTGGTGGAAATAAACACAGTGGATAAATACC
AAGGAAGGGACAAAAGTGTTATCCTGCTCTCATTTGTAAGAAGCAAAAAAGAACCACTTG
CAGAAAAGAAAGGGGAGTTGTTGAATGACTGGAGGCGTTTGAATGTTGGTATTACTCGAG
CCAAGCACAAGTTGGTAATGGTCGGCTGTACACGCAGTTTATTGGAGTACGAGCCGTGCA
AGAAGATAATTGAATATGTGCAATCCAACAGCTTACTACATTTTATATAACTTACACACT
TTTTTTATTTGATGTTTTTCACTGATTTTTTTGTCACATTTTCATCAGGCTTTGTTTGCA
CCTTTTATAATAGTGACATTTGTTTTGCAAATCTTTTACACTTTTGTATGTTCTTAAAAA
AGTTGGTGTAATTTTATATATAATCTGTTTTCTTTTTCTTTGAAAAAAACCTATATTTCA
CCATGACAATTTTCTACTGTTTTTACCGCATCCACTTTTGTCAAAACATTTCTGACTAAT
TTTTTATTTTCTCTTTGATTTGAACGCCAATCTTTTCAATAAAATTATATTTCAGATGAA
TA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RENT1_HUMAN | 31.25 % | 158 | 5.55E-39 |
| SMBP2_HUMAN | 26.182 % | 164 | 5.16E-41 |
| DNA2_HUMAN | 39.706 % | 707 | 0 |