- Transcript 'KH2012:KH.C1.133.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.133.v2.A.SL1-1
Possible name(s)
CALU; RCN1; RCN3
Gene model
Location
KhC1 [2,000,294 / 2,001,976]
Amino acid sequence
Length: 310
>KH.C1.133.v2.A.SL1-1
TMKGLMVLLMCTVAFAAVAKKERVLDQKLSDKEPGSPDYDHEAFLGKDQAQEHDELPEEE
SKRRLGIIVDQVDKDGDQNITEQELVDWIKFTQKRYIREDSNKQFLQHDTNKDGKIEWDE
YKEATYGFMEEQANQDEEDGFSYKKMIDRDHKRFQAADGDKNGNCNEEEFRAFLHPEEYD
HMKEIVTKETMDDIDKNSDGFVDLKEYIGDMISEDESEGEKPDWVVVEEQQFHEHRDKDK
DGKLNLEEVRDWIMPSDYDHAVAEAKHLVHESDDDKDGSLSKEEILAHHDKFVGSQATDW
GEALKRHDEF
Nucleotide sequence
Length: 1,682
>KH2012:KH.C1.133.v2.A.SL1-1
GTTTCAATTTAGTATAATTTCATCCTTAAACAATGAAGGGTTTAATGGTGTTACTTATGT
GCACTGTAGCTTTTGCTGCAGTTGCAAAGAAAGAAAGAGTTCTGGATCAAAAACTTAGCG
ACAAAGAGCCGGGTTCTCCAGATTATGATCATGAGGCGTTTCTTGGTAAAGATCAAGCAC
AAGAGCATGATGAACTGCCGGAAGAAGAGAGCAAAAGACGACTCGGGATCATTGTTGATC
AAGTAGACAAGGATGGTGATCAAAACATCACGGAACAAGAACTTGTGGATTGGATCAAGT
TCACACAAAAGAGATACATCCGGGAGGATTCAAATAAGCAGTTCCTTCAGCATGACACAA
ACAAAGATGGAAAGATTGAATGGGACGAGTACAAGGAGGCAACCTATGGGTTTATGGAGG
AGCAAGCAAATCAGGATGAAGAGGATGGCTTCAGTTATAAAAAGATGATTGATCGTGATC
ATAAGAGGTTTCAAGCTGCTGATGGAGACAAGAACGGAAATTGCAATGAAGAGGAGTTCC
GAGCATTCCTGCATCCAGAGGAGTATGATCATATGAAGGAGATCGTTACTAAGGAAACCA
TGGATGATATTGACAAGAACAGTGATGGTTTTGTGGATCTCAAAGAGTACATCGGTGACA
TGATCAGTGAAGATGAGAGTGAAGGAGAGAAGCCGGATTGGGTTGTGGTGGAGGAGCAGC
AGTTCCATGAGCACAGGGACAAAGATAAAGACGGGAAACTGAACTTGGAGGAGGTCCGTG
ATTGGATCATGCCATCAGATTACGATCACGCAGTTGCAGAAGCAAAGCATCTTGTCCATG
AGTCAGATGATGACAAAGACGGTTCTCTCAGCAAAGAAGAAATTCTCGCTCATCACGATA
AGTTTGTTGGTTCCCAAGCCACAGACTGGGGTGAAGCTTTAAAACGCCATGACGAGTTCT
AAACCATGACCCTGTTTGACTCTCTAGAACTTTTTCATTTCTATCAGTTTTGCCTTGAAA
CTCACAACAACCATAGCTAGATTTTTCATTTTTGTCACAGAGTTTATGTAACTGCCTTGT
TTGAATAAGTCCCAACTCCCAACTTAAATAGTATGGTCATTAATATTAGTGTTATTTTTA
CTTTTTTAGATACATGTTGAACTACAATACAAAGTGAAGCAATTTTAAATTCCAGCTAGC
ATTATAAGCTGCATAACATTCTGAGATTTTCTGGTGGCCTTTAGTATTACAATACATATA
TAATATGTTGTTTTTTAACTAATACAAATAGTTTTCCTTGCAGTGACTTTCATATTAAAA
ACTTAAGTTCAGTGCCATAATACACATGATTTTTTCAAAACAACATTCTGTAATAATTTT
AAGTAGTTACATCCCCCCCTTAAAGATTGCCTTAAAACTATTTCGTTTTTTTTTTTTAAA
ATTTTGAACCATTTATTGGATTTTTATGGCGGCGCATTTGGGTGTGGGTGAAATTTGTTG
CTATTACACAACTGCCTTTACTCTAAAATATCAATATGTTTATCTTTGGATGTGCAATTA
CTGCCTGCATTTGATTGGACACTCATTCGATCATTGCACAAATTCTGAGTAAGATTTGAT
AACAACCGGTAAACTCGTATTTTACACAACGGTTTTCAATAAAAGTGTTGGGATTTGAAC
AG
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[59-173] 8.61E-13 - T[145-303] 1.09E-25 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[60-95] 10.664 - T[96-131] 10.915 - T[145-180] 7.679 - T[182-217] 9.548 - T[237-259] 8.711 - T[260-295] 8.795 |
| SMART |
EF_hand_dom (IPR002048) - T[64-92] 58.0 - T[100-128] 46.0 - T[149-177] 16.0 - T[186-214] 0.43 - T[228-256] 74.0 - T[264-292] 80.0 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[73-85] . - T[109-121] . - T[158-170] . - T[195-207] . - T[237-249] . - T[273-285] . |
| Pfam |
EF_hand_dom (IPR002048) - T[103-123] 0.0046 - T[189-207] 0.043 - T[264-286] 0.032 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALU_HUMAN | 57.508 % | 331 | 5.77E-114 |
| RCN3_HUMAN | 48.913 % | 260 | 5.99E-86 |
| RCN1_HUMAN | 53.311 % | 286 | 5.63E-96 |
