- Transcript 'KH2012:KH.C1.133.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.133.v1.A.SL1-1
Possible name(s)
CALU; RCN1; RCN3
Gene model
Location
KhC1 [2,000,294 / 2,001,976]
Amino acid sequence
Length: 307
>KH.C1.133.v1.A.SL1-1
TMKGLMVLLMCTVAFAAKERVLDQKLSDKEPGSPDYDHEAFLGKDQAQEHDELPEEESKR
RLGIIVDQVDKDGDQNITEQELVDWIKFTQKRYIREDSNKQFLQHDTNKDGKIEWDEYKE
ATYGFMEEQANQDEEDGFSYKKMIDRDHKRFQAADGDKNGNCNEEEFRAFLHPEEYDHMK
EIVTKETMDDIDKNSDGFVDLKEYIGDMISEDESEGEKPDWVVVEEQQFHEHRDKDKDGK
LNLEEVRDWIMPSDYDHAVAEAKHLVHESDDDKDGSLSKEEILAHHDKFVGSQATDWGEA
LKRHDEF
Nucleotide sequence
Length: 1,673
>KH2012:KH.C1.133.v1.A.SL1-1
GTTTCAATTTAGTATAATTTCATCCTTAAACAATGAAGGGTTTAATGGTGTTACTTATGT
GCACTGTAGCTTTTGCTGCAAAAGAAAGAGTTCTGGATCAAAAACTTAGCGACAAAGAGC
CGGGTTCTCCAGATTATGATCATGAGGCGTTTCTTGGTAAAGATCAAGCACAAGAGCATG
ATGAACTGCCGGAAGAAGAGAGCAAAAGACGACTCGGGATCATTGTTGATCAAGTAGACA
AGGATGGTGATCAAAACATCACGGAACAAGAACTTGTGGATTGGATCAAGTTCACACAAA
AGAGATACATCCGGGAGGATTCAAATAAGCAGTTCCTTCAGCATGACACAAACAAAGATG
GAAAGATTGAATGGGACGAGTACAAGGAGGCAACCTATGGGTTTATGGAGGAGCAAGCAA
ATCAGGATGAAGAGGATGGCTTCAGTTATAAAAAGATGATTGATCGTGATCATAAGAGGT
TTCAAGCTGCTGATGGAGACAAGAACGGAAATTGCAATGAAGAGGAGTTCCGAGCATTCC
TGCATCCAGAGGAGTATGATCATATGAAGGAGATCGTTACTAAGGAAACCATGGATGATA
TTGACAAGAACAGTGATGGTTTTGTGGATCTCAAAGAGTACATCGGTGACATGATCAGTG
AAGATGAGAGTGAAGGAGAGAAGCCGGATTGGGTTGTGGTGGAGGAGCAGCAGTTCCATG
AGCACAGGGACAAAGATAAAGACGGGAAACTGAACTTGGAGGAGGTCCGTGATTGGATCA
TGCCATCAGATTACGATCACGCAGTTGCAGAAGCAAAGCATCTTGTCCATGAGTCAGATG
ATGACAAAGACGGTTCTCTCAGCAAAGAAGAAATTCTCGCTCATCACGATAAGTTTGTTG
GTTCCCAAGCCACAGACTGGGGTGAAGCTTTAAAACGCCATGACGAGTTCTAAACCATGA
CCCTGTTTGACTCTCTAGAACTTTTTCATTTCTATCAGTTTTGCCTTGAAACTCACAACA
ACCATAGCTAGATTTTTCATTTTTGTCACAGAGTTTATGTAACTGCCTTGTTTGAATAAG
TCCCAACTCCCAACTTAAATAGTATGGTCATTAATATTAGTGTTATTTTTACTTTTTTAG
ATACATGTTGAACTACAATACAAAGTGAAGCAATTTTAAATTCCAGCTAGCATTATAAGC
TGCATAACATTCTGAGATTTTCTGGTGGCCTTTAGTATTACAATACATATATAATATGTT
GTTTTTTAACTAATACAAATAGTTTTCCTTGCAGTGACTTTCATATTAAAAACTTAAGTT
CAGTGCCATAATACACATGATTTTTTCAAAACAACATTCTGTAATAATTTTAAGTAGTTA
CATCCCCCCCTTAAAGATTGCCTTAAAACTATTTCGTTTTTTTTTTTTAAAATTTTGAAC
CATTTATTGGATTTTTATGGCGGCGCATTTGGGTGTGGGTGAAATTTGTTGCTATTACAC
AACTGCCTTTACTCTAAAATATCAATATGTTTATCTTTGGATGTGCAATTACTGCCTGCA
TTTGATTGGACACTCATTCGATCATTGCACAAATTCTGAGTAAGATTTGATAACAACCGG
TAAACTCGTATTTTACACAACGGTTTTCAATAAAAGTGTTGGGATTTGAACAG
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[56-170] 8.12E-13 - T[142-300] 1.03E-25 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[57-92] 10.664 - T[93-128] 10.915 - T[142-177] 7.679 - T[179-214] 9.548 - T[234-256] 8.711 - T[257-292] 8.795 |
| SMART |
EF_hand_dom (IPR002048) - T[61-89] 58.0 - T[97-125] 46.0 - T[146-174] 16.0 - T[183-211] 0.43 - T[225-253] 74.0 - T[261-289] 80.0 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[70-82] . - T[106-118] . - T[155-167] . - T[192-204] . - T[234-246] . - T[270-282] . |
| Pfam |
EF_hand_dom (IPR002048) - T[100-120] 0.0045 - T[186-204] 0.043 - T[261-283] 0.032 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALU_HUMAN | 57.188 % | 329 | 4.89E-113 |
| RCN3_HUMAN | 48.913 % | 260 | 5.45E-86 |
| RCN1_HUMAN | 54.027 % | 285 | 1.79E-95 |
