- Transcript 'KH2012:KH.C11.20.v1....'
Transcript Model
Transcript Id
KH2012:KH.C11.20.v1.A.SL1-1
Possible name(s)
KH.C11.20
Gene model
Location
KhC11 [4,522,453 / 4,525,806]
Amino acid sequence
Length: 986
>KH.C11.20.v1.A.SL1-1
KSLCGKVYVRTMSKFSCQFCSKVYSSKNSLWAHRKLYHRKQWELSKTKKANCILCEFSAL
KSKDLLWHYNNNHDKNLKLMQQNFVSESDFNEWKKDLERKTNTLFGQTCGKERSQDYEVT
RYYCHRSGNYVPSGTGARSLKAQGSLKMNGKCPAYMVKRKRLSSGRISVEYCSDHVGHSV
ELCHLKLSSEIRNMIRSKIENGMESKQILDSIRDRIGNIDRDAMVTRKDIINIRNQCDVT
KIEKQTEEVKSEKIWVTELSDEIDANDVVMYKAQEVSDYSLQEDDFVLCIQTEFQKHMWK
KFGQKMICIISTKFTTECELSLLTLLVFDEFGETIPTAWIICNREDTEVLTCAFNGLKEK
CGDITAELFMSDLDDNYYNAWQSVFKQPIQRLYCNWLVNKRWRKQISEFVPKTKTQVTLY
AYLKTLHYETNEDKFDKMLREARSYLVKTSPQFHEYFLKNFVFEEKYRMWASCFRIGSVA
KTNVEAFYRVLNEAYFGKKGNRSTGKLLVTLIKMSRDKCLEQFIKTEKGKSTRLLAAINK
RHRLASTVREVTCLACDQWKVDDLDDQECTVKRIQPQCMDNCQIKCSICNICVHMYTCTC
SDFLVHTVACKHIHAVKMSGAESEPLRGQTSVQQNCKKEFQGIVESTIVGTSKKTQSIKS
KLIKDLESVIELVRTVDDEGCLNKMMHHTTAMLSIGKRRTQPLPIFPTLPPVNITPATKQ
SKDHSPFLSVQLNVTKKRINNLAIASNPTPKPTILPENRLQAHNNAECSKVLKRTHTSTP
VRILSAKKHCTKPNLPMPVKVTRINKVAFKSTQMLADKQIPLEEYLQSHNIANSIKGLKR
IQPSTPVQPIHILSAKKQCTIKKPSLPMQDVVCRNEINDFSITPTPVPKLATEQVSPDKG
LEQSNADCIKGTNQTQTLPQLPSQKIPSAEKQGAIQKPFLSMQVKVSKKRINDFASKLST
KPSTDQGSSKKSLQAHNNGDCLVVIA
Nucleotide sequence
Length: 3,353
>KH2012:KH.C11.20.v1.A.SL1-1
GAATTTAAGAATTAATACTGTTTGTGCAACATTGTGATATCAATATCATAGAAATCTTTA
TGTGGAAAAGTTTATGTTCGCACAATGTCAAAATTTTCGTGCCAATTTTGTTCCAAAGTA
TATTCGAGTAAAAATTCTTTATGGGCGCATCGAAAACTATATCACAGAAAACAATGGGAG
CTATCAAAGACAAAAAAGGCTAACTGTATCCTCTGTGAGTTTAGCGCACTAAAGAGTAAA
GACTTACTGTGGCATTACAACAATAACCATGATAAAAACTTGAAGCTGATGCAACAGAAT
TTTGTTTCGGAAAGTGATTTTAATGAATGGAAAAAAGATTTGGAGAGAAAAACAAACACT
TTGTTCGGTCAGACGTGCGGGAAAGAAAGAAGTCAAGATTATGAAGTGACACGTTACTAT
TGCCACAGGTCGGGCAATTACGTTCCTAGTGGTACCGGTGCTCGATCTCTGAAGGCGCAA
GGAAGTTTGAAAATGAACGGCAAATGCCCTGCTTATATGGTAAAGCGGAAACGATTGTCG
TCCGGTCGAATTTCTGTTGAATATTGTTCAGATCATGTCGGGCACAGCGTTGAACTTTGT
CATTTAAAATTATCATCGGAAATCCGAAACATGATTCGAAGCAAAATAGAAAATGGGATG
GAATCGAAACAAATCTTGGACAGCATTCGTGATAGAATTGGGAATATTGATAGGGATGCT
ATGGTTACTAGAAAGGATATTATTAACATTCGTAACCAGTGCGATGTCACAAAAATAGAA
AAACAAACAGAAGAAGTGAAAAGTGAGAAAATTTGGGTGACAGAATTATCTGATGAGATT
GATGCTAACGATGTAGTAATGTACAAGGCACAAGAGGTTAGTGATTATAGTTTACAAGAA
GATGATTTTGTTTTATGTATACAGACGGAGTTTCAAAAGCACATGTGGAAAAAGTTTGGC
CAAAAAATGATTTGCATTATCTCAACTAAGTTTACTACCGAGTGTGAATTGAGTTTGTTA
ACTTTGTTGGTGTTTGATGAGTTTGGAGAAACTATTCCAACAGCTTGGATCATTTGTAAC
AGGGAAGATACTGAGGTTCTTACTTGTGCTTTTAATGGTCTAAAAGAAAAATGTGGTGAT
ATTACCGCAGAACTGTTTATGAGTGATTTGGACGACAACTATTATAACGCTTGGCAATCC
GTGTTCAAACAACCAATACAAAGACTCTACTGTAATTGGCTTGTCAATAAACGCTGGAGA
AAACAGATCTCGGAGTTTGTTCCTAAGACAAAGACGCAAGTTACATTATATGCTTACCTT
AAAACGCTCCATTATGAAACTAATGAGGACAAGTTTGACAAAATGTTGCGAGAAGCACGA
AGTTATCTTGTTAAAACATCTCCACAGTTCCACGAGTACTTTCTCAAGAATTTTGTGTTT
GAAGAGAAATATCGGATGTGGGCGTCGTGTTTCAGGATTGGTTCAGTTGCCAAGACAAAT
GTGGAGGCTTTTTACAGGGTTTTAAATGAAGCTTATTTTGGCAAGAAGGGAAACAGAAGT
ACAGGCAAACTTTTAGTGACACTTATTAAAATGTCAAGGGACAAATGTTTGGAGCAATTC
ATTAAAACTGAGAAGGGAAAATCTACCCGTCTTCTTGCTGCAATAAACAAGCGGCACAGG
CTTGCCAGTACAGTAAGGGAGGTGACCTGTTTAGCATGTGATCAATGGAAGGTTGATGAT
CTTGATGACCAAGAATGCACTGTAAAGAGGATTCAGCCACAATGTATGGATAATTGCCAA
ATCAAGTGTTCTATATGCAATATATGTGTGCATATGTACACATGTACGTGTAGTGACTTT
TTGGTACATACAGTTGCATGCAAGCATATTCATGCTGTGAAAATGTCAGGTGCAGAAAGT
GAACCATTAAGAGGGCAAACTTCTGTTCAGCAAAATTGCAAAAAAGAATTTCAAGGCATT
GTAGAAAGTACTATTGTTGGGACATCAAAGAAAACGCAATCCATCAAGTCAAAGTTGATC
AAAGACCTTGAATCAGTAATTGAGTTAGTTAGGACAGTAGATGATGAAGGATGCTTGAAC
AAGATGATGCACCACACCACAGCAATGTTATCCATTGGTAAACGTCGAACACAACCGTTA
CCAATATTCCCAACATTACCACCAGTAAATATCACACCTGCGACGAAACAAAGTAAAGAT
CATAGTCCATTTCTTTCAGTTCAACTCAATGTAACCAAAAAGAGGATAAACAATCTTGCA
ATTGCATCTAATCCAACCCCAAAGCCTACAATTCTACCGGAGAATCGTTTACAGGCTCAT
AATAATGCAGAATGTAGTAAAGTATTGAAACGCACACACACGTCAACACCAGTGCGTATC
CTCTCTGCTAAGAAACATTGTACAAAACCAAATCTCCCAATGCCAGTTAAAGTTACTAGA
ATAAATAAAGTTGCATTTAAATCAACACAAATGCTTGCAGATAAACAGATTCCACTAGAG
GAATATTTACAGTCTCATAATATTGCAAATTCTATTAAAGGACTGAAACGCATTCAGCCA
TCAACACCAGTACAACCAATACATATTCTTTCTGCTAAGAAACAATGTACAATTAAGAAA
CCATCACTTCCAATGCAGGACGTAGTTTGCAGAAACGAAATAAATGATTTTTCGATAACA
CCCACACCAGTCCCCAAACTTGCAACTGAACAGGTTTCCCCAGATAAGGGTTTGGAACAA
AGTAATGCAGATTGTATAAAAGGAACGAACCAAACACAAACATTACCTCAATTACCTTCG
CAAAAGATTCCGTCTGCTGAAAAACAAGGTGCAATTCAAAAACCATTTCTTTCAATGCAG
GTGAAAGTTAGCAAAAAGAGAATAAATGATTTTGCTTCTAAACTTTCCACAAAACCTTCA
ACTGACCAAGGTTCATCAAAGAAGAGTTTACAGGCTCATAATAATGGAGACTGTTTGGTG
GTGATTGCATAAATATCTAAATAAAACATTGATAAATACTGTTTCTCTAATCCATTTTAT
TTACTTTTATTTAACTGTTTCTCCAAAAAATTGTTGGTTTTGTGCGACAGTGTGAACCTT
ATACAGTAATACAATTTAAAAGTTTAGCTGGTCAACCATATAAAATTTCCATCGAAGTAA
AAAACATTGCTATGTGTAGTGTAAGAGCTTAACTTCATTACTAACTCGTTTTACTGTGTA
TAGGAATATATTATTATTTCTACCGGTATATAATCCATCAATTTTCTTCATACATTGTTA
TTATTTCTTATATATACTTGTGTCTTAAAAAAGTTACATTCTTTTATTTATAG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[15-43] 10.242 |
| SMART |
Znf_C2H2_type (IPR013087) - T[15-38] 0.016 - T[50-73] 37.0 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[17-38] . |
| Pfam |
MULE_transposase_dom (IPR018289) - T[312-400] 2.3E-9 |
| ProSiteProfiles |
Znf_SWIM (IPR007527) - T[589-621] 8.691 |
| Protein Name | Identity | Bit Score | e-value |
|---|