Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.1120.v1.A.SL1-1

Possible name(s)

MRPL28

Gene model

KH2012:KH.C1.1120

Location

KhC1 [1,112,462 / 1,113,513]

Sequences

Amino acid sequence

Length: 297

>KH.C1.1120.v1.A.SL1-1
VSGLRLGFLHFSMPRIPLPLHKIPLPGYKPGRSSWTHKLPRNSYLFDPAVKYPIYSKLPE
KWREDYEEPKPMLYQKIETGTKRPQASGLWVKGKNGEPQRVANIPLQVRYPPESREGLWG
GEGIVWGFKYARGKKMSRKYYKVWKPQLFTRTLYSEILDKKFKTTVTGLTLDLIDEAYGF
DFFILNTSSTVLQEFGSKLKREILLRLADKDNLFPNNPVKQEEILKKYGKYIMDKEEASW
VGLTLKEALEKQMKIELENRKPVPLLEKYTEQLKEQLKLSQTVVSEDAALHLHSAKK

Nucleotide sequence

Length: 1,051

>KH2012:KH.C1.1120.v1.A.SL1-1
GTTTCTGGTTTAAGGTTAGGATTCTTGCATTTCAGCATGCCAAGAATTCCTCTGCCGTTG
CATAAAATACCATTGCCTGGGTACAAGCCTGGGAGATCTAGTTGGACTCATAAGCTGCCA
AGAAACTCATATTTGTTTGACCCTGCTGTGAAATACCCAATTTATTCAAAGTTACCAGAA
AAATGGCGGGAAGATTATGAAGAACCAAAGCCAATGTTGTATCAGAAGATTGAAACAGGA
ACTAAAAGGCCACAGGCTTCAGGACTATGGGTAAAAGGTAAAAACGGCGAACCTCAAAGA
GTTGCGAATATACCTTTGCAAGTAAGGTACCCTCCTGAATCACGAGAAGGGTTATGGGGT
GGGGAGGGGATAGTTTGGGGGTTTAAATATGCCCGCGGGAAAAAGATGTCAAGAAAATAC
TACAAAGTGTGGAAACCTCAACTGTTTACGAGAACTTTGTACAGTGAGATTTTGGATAAA
AAGTTTAAAACAACTGTTACTGGGTTGACTCTTGACTTGATTGACGAAGCTTATGGATTT
GATTTTTTTATTCTTAACACCTCGTCTACGGTTCTACAGGAGTTTGGTTCAAAACTGAAA
AGAGAAATATTGCTACGTTTAGCAGATAAAGACAATCTATTTCCCAACAATCCTGTTAAA
CAAGAAGAGATTCTCAAAAAATATGGAAAATATATTATGGATAAAGAAGAGGCAAGTTGG
GTTGGATTAACTTTAAAAGAAGCTTTGGAAAAACAAATGAAAATCGAACTTGAAAATAGA
AAGCCAGTTCCTTTGCTGGAAAAATATACAGAACAGTTGAAAGAACAACTTAAGTTGTCA
CAAACTGTAGTATCTGAAGATGCTGCGTTGCATCTACATAGTGCTAAGAAATAGTCAAAA
TCAAACCATTTTAAAATTATTATTTTTATCAAATTGTATAAAGTCGATCTGTGGTAAATT
TAATTGGCTTTGGGTAAAATTAACTGAATGTCATGTCAAGTTTTTTTTGCTGCTATGTGC
CAATGTCTATGACATGCTTATTATGTTACAG

InterProScan

PANTHER	Ribo_L28/L24 (IPR026569) - T[53-290] 6.3E-58
Gene3D	Ribo_L28/L24_sf (IPR037147) - T[77-216] 1.2E-19
SUPERFAMILY	L28p-like (IPR034704) - T[114-189] 8.24E-6
Pfam	Ribo_L28/L24 (IPR026569) - T[122-175] 1.1E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM28_HUMAN	47.768 %	188	1.04E-58