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  1. Transcript 'KH2012:KH.C1.108.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.108.v1.A.SL1-1

Possible name(s)

SS18; SS18L1; SS18L2

Location

KhC1 [2,118,538 / 2,119,754]

Sequences

Amino acid sequence

Length: 243

>KH.C1.108.v1.A.SL1-1
FNNMSSAFVPQAVRNPKSAVTQETIQKMLDENSRLIQCIVDEQQNGRMQDCSRYQQILHR
NLVWLATVADSNQSNGQNMMAGTSPSPHMVNKDMNQINMQQTSTAAVSSQQAPYVQNTAS
HTNPTHTSSENAQTSVNASQQAPVQAQHMENQQFQQQQQQSTINQNINQQPAPVVTHPRV
QVPQVHYPGTKQPAVSYPSQPQPMYSNYQTQPGYGQHTQQHTTYQQQPQQQSYPQGQYPY
PEQ

Nucleotide sequence

Length: 1,216

>KH2012:KH.C1.108.v1.A.SL1-1
TGTGTATACAAAACTTTTCCAGATTATCAAGCAGCAAGAATTCAATTTAGCCACTGCAAG
GAAATTCCTGCCTTTTAATTTAATAATATGTCGAGTGCTTTTGTCCCTCAGGCCGTTCGG
AATCCAAAATCAGCTGTCACTCAAGAAACTATCCAAAAGATGCTTGATGAAAACAGCAGA
TTAATTCAATGCATAGTTGATGAACAACAAAATGGAAGAATGCAAGACTGTTCTCGCTAC
CAACAAATTCTGCACCGAAATCTTGTGTGGCTTGCTACTGTGGCTGATTCAAACCAATCT
AACGGTCAAAACATGATGGCTGGTACATCGCCTTCTCCCCATATGGTTAACAAAGACATG
AACCAAATAAACATGCAGCAAACCAGCACTGCGGCTGTTTCCTCACAGCAAGCACCATAT
GTACAGAACACAGCCTCGCATACAAATCCAACTCACACATCAAGCGAAAACGCCCAAACT
TCTGTAAATGCTTCTCAGCAAGCACCAGTTCAAGCACAGCACATGGAAAACCAGCAGTTT
CAGCAGCAACAGCAGCAATCAACCATAAACCAAAACATCAACCAACAGCCTGCACCTGTA
GTGACCCACCCAAGAGTACAGGTTCCACAGGTCCACTACCCAGGCACCAAACAGCCAGCA
GTATCCTACCCTTCCCAACCCCAACCCATGTACAGCAACTACCAAACCCAGCCTGGTTAT
GGTCAACACACCCAGCAGCACACTACATACCAGCAACAGCCTCAGCAACAATCATATCCA
CAAGGCCAGTACCCTTACCCTGAACAGTAAATCTCATACCAACAATGTTGTATGAGTAGG
TACTTTACAGCTGTACCTATTGATGTGTTAAATTTTTAAGTGGTGAAAACAAAGTTTCAG
ATTTCCAACAGACTGAACATAATGCTAAAACTAGCCATAAAAACTGGTGTCGATTTAAAA
CAAATGATGAAAAGACCTACACTTGAGTCATTTAATTATACTTTACAATATAGACTGTTT
GATGCAAAATTCTGTTCAATAGCCTAACTTATTTTGCGTAACACAGTAAATATGTACATT
GCCAGTATAGATAGGCTAACTATGTTATCAATTTAATACAGCCCTTGTGTCGTCATATGC
ATCACCTACAACTTAAGTATTTGATATTTTGAGTTGACCAATCTGTTTTGTTGATTACAT
GAATACATGTAAAGAG

InterProScan

Pfam
SS18_fam (IPR007726) - T[18-77] 2.8E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CREST_HUMAN 49.02 % 96.3 4.53E-23
S18L2_HUMAN 55.072 % 85.1 1.23E-21
SSXT_HUMAN 47 % 89 1.61E-20