- Transcript 'KH2012:KH.C9.38.v5.A...' >
- Clone 'cima820462' >
- Transcript 'Moocci.CG.ELv1_2.S65...' >
- Transcript 'KH2012:KH.C1.1031.v1...' >
- Transcript 'KH2012:KH.C1.1074.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1074.v1.A.SL1-1
Possible name(s)
FBXW11; FBXW7; TRAF7
Gene model
Location
KhC1 [6,665,505 / 6,674,552]
Amino acid sequence
Length: 700
>KH.C1.1074.v1.A.SL1-1
VTFHSVMSRYRFGSTRSPTSNDTENTPVPLRRSSASVSGASRSRSSLFSQDGRASTPRLE
TTFGPSFSTVTTITTDEGKVEYQHQRTTSMSSCKSFSDSREDLHGGSTHSSLQRGIAATA
QFNLFRSNSHDSASSTLSQSSFRSRNTEDDAPLVFVETPSAQLYCKICQQVYKDPVIMSC
GHSYCKHCSVSVDACPVDNKKMSSILGNLAVSEQVGALYIHCRYGCKLVNDHSNEYEVNQ
SGCPFTVKLAERRTHEDSCLYAPISCPNNPMCPTMLRMHLEEHLKSCKNLQCANHKYGCL
FIGDRETQAAHMKGCKYEFVKDFLQITEEKINKMHLSLKQADEENTFLRSMLSKTVSRMD
ELEKNFEMKLEVMSTNQSKLVEELREFRQDNALINNQLQDLNTRLHISGVGVFDPQQIFK
CKGTFVGHTGPVWCLCVHGDYLFSGSSDKQIKVWDTATNYKCQKTLEGHGGIVLALTAHG
DKLFSGSADCTIKIWSIDTLVELNSIAAHENPVCTLVCINNMLFSGSLKSIKVWEVESDN
LKFKQELEGLNHWVRALVAQHDYLYSGSYQTIKIWDVRTLACVHVLQTSGGSVYSIAVTN
HHILCGTYENSIHVWDLRTHEPVAQLTGHVGIVYALAVLSTPEQTKVFSASYDRSLRVWS
MENMICTQTLIRHQGSVVALAVSRGRVFSGGVDFTVKVWQ
Nucleotide sequence
Length: 2,453
>KH2012:KH.C1.1074.v1.A.SL1-1
TGTAAAATGTCATGTTCCTGCTGTTAGGTAACTTTCCATTCGGTTATGTCAAGATATAGA
TTCGGATCAACTCGTTCACCAACCTCCAATGATACGGAGAACACTCCTGTTCCACTTCGT
CGATCAAGCGCATCTGTGTCCGGAGCATCAAGATCTCGATCTTCACTCTTCAGTCAGGAT
GGGAGAGCTTCTACTCCAAGATTAGAAACTACGTTCGGACCTTCATTTTCCACAGTGACC
ACAATAACAACAGACGAAGGGAAAGTCGAATATCAGCATCAACGAACGACCTCCATGTCC
AGCTGCAAGTCCTTCAGTGATAGCAGGGAAGATTTACATGGTGGAAGTACACACAGCAGC
CTCCAACGAGGCATTGCAGCCACTGCCCAGTTCAATTTATTTCGTTCAAATTCTCACGAC
TCTGCATCATCCACTCTCTCACAATCATCTTTTAGATCCAGGAACACAGAGGATGATGCA
CCTCTTGTGTTTGTGGAGACACCTTCTGCCCAACTTTACTGTAAGATTTGTCAACAAGTT
TACAAAGACCCTGTAATTATGTCATGTGGACATTCTTACTGCAAGCATTGCTCTGTATCT
GTTGATGCTTGTCCTGTTGATAATAAAAAGATGTCTTCAATCCTGGGCAACTTGGCTGTG
AGTGAGCAAGTAGGAGCGTTATACATCCACTGTAGGTATGGATGCAAACTCGTTAACGAT
CATTCCAATGAATATGAAGTCAACCAGTCTGGATGTCCTTTCACTGTGAAACTTGCTGAA
AGAAGAACACATGAAGATTCATGTTTATATGCTCCCATATCTTGCCCTAACAACCCAATG
TGCCCAACCATGCTACGCATGCATTTAGAAGAACATTTAAAAAGCTGCAAAAACCTACAG
TGTGCCAATCATAAATATGGATGTTTGTTCATTGGTGATCGTGAGACACAAGCAGCTCAT
ATGAAAGGATGCAAGTATGAGTTTGTGAAAGACTTTCTGCAAATTACGGAAGAAAAAATT
AACAAAATGCATCTCTCACTAAAGCAAGCTGATGAAGAAAACACTTTCCTAAGATCGATG
CTATCAAAAACTGTGAGTAGAATGGACGAACTGGAAAAGAACTTTGAAATGAAATTAGAG
GTAATGAGCACAAATCAATCGAAATTAGTTGAAGAATTACGTGAATTCCGACAAGACAAC
GCTTTAATTAACAACCAGCTGCAAGATTTAAACACAAGACTCCATATAAGTGGTGTAGGG
GTGTTTGACCCACAACAAATATTTAAATGCAAGGGAACTTTTGTCGGTCACACTGGGCCA
GTATGGTGCCTATGTGTACATGGTGATTATCTATTCAGTGGTTCATCTGATAAACAAATC
AAGGTTTGGGACACTGCCACCAACTACAAATGTCAGAAGACACTCGAAGGTCATGGAGGG
ATAGTTCTTGCTCTCACAGCTCATGGAGATAAACTGTTCAGTGGATCTGCTGATTGTACC
ATTAAAATATGGAGCATAGATACTTTGGTGGAACTTAACAGCATAGCTGCTCATGAAAAC
CCTGTATGTACCCTGGTATGCATCAACAATATGTTATTCAGCGGCTCTCTAAAATCCATC
AAGGTATGGGAAGTTGAGAGTGACAACTTAAAATTCAAACAAGAACTTGAAGGATTGAAC
CATTGGGTGCGAGCATTAGTTGCACAGCATGATTATCTATACAGTGGTTCTTATCAAACT
ATTAAAATTTGGGATGTGAGAACCTTAGCGTGTGTCCACGTACTACAGACTTCAGGTGGA
AGTGTTTATTCAATAGCTGTGACCAATCACCATATATTGTGTGGAACATATGAGAATTCA
ATTCATGTATGGGACCTTCGAACACATGAGCCCGTTGCGCAATTAACTGGCCATGTTGGC
ATCGTGTACGCTCTTGCTGTGTTGAGTACGCCAGAACAAACAAAAGTCTTTAGTGCATCC
TATGACCGATCATTAAGGGTCTGGAGCATGGAAAATATGATCTGCACCCAGACACTTATC
CGACATCAAGGTAGTGTGGTTGCACTCGCTGTATCACGTGGCAGAGTCTTCTCGGGGGGT
GTAGACTTTACAGTGAAAGTGTGGCAGTAGAAAAGTGGTGCATTTTAAAAATTTTAAATT
TTTACATGTTTTCTACTTTTATCTACAACAGGCAAAATTCTGTTTCAAACTAGAACTAAA
ACCTTTACCAACATAGGGAGCAGTTATCCCATAATGACCCATTGCGTTTTTATCTTTTGA
ATATTGCCCTGTTAACCTGCACTTACGTTCTTCCCTGCGATCTACGAATCAATATATTCA
AATCTAATCGTTTGTTTTTATGTTTTCTTGCAGTTGGTTGCACTATGTTTTACATTGTAT
CAGAATGCACTCCTGAATACAAATAAAGCAGTAATTTGATTCCAAATAATAGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[122-219] 3.5E-10 - T[237-284] 1.0E-6 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[165-188] 9.1E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[165-199] 11.28 |
| SMART |
Znf_RING (IPR001841) - T[165-198] 7.7E-6 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[217-287] 2.48E-7 |
| ProSiteProfiles |
Znf_TRAF (IPR001293) - T[254-325] 10.131 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[404-586] 4.1E-41 - T[590-700] 1.0E-23 |
| SMART |
WD40_repeat (IPR001680) - T[418-455] 6.0E-10 - T[459-496] 1.1E-6 - T[499-535] 1.4 - T[540-576] 1.9 - T[579-616] 0.055 - T[619-660] 2.9E-4 - T[663-700] 0.0023 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[420-700] 5.25E-66 |
| Pfam |
WD40_repeat (IPR001680) - T[420-455] 7.7E-7 - T[461-496] 1.3E-5 - T[622-660] 0.0057 - T[666-699] 0.14 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[425-700] 44.373 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[425-464] 11.578 - T[466-505] 10.809 - T[626-669] 9.974 - T[670-700] 10.174 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[442-456] 2.4E-6 - T[483-497] 2.4E-6 - T[647-661] 2.4E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[442-456] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 30.258 % | 124 | 2.16E-29 |
| FBW1B_HUMAN | 27.143 % | 115 | 8.21E-27 |
| TRAF7_HUMAN | 58.358 % | 807 | 0 |