- Region 'REG00001023' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C3.424.v1....' >
- Transcript 'KH2012:KH.C11.424.v2...' >
- Transcript 'KH2012:KH.C10.346.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.346.v1.A.nonSL6-1
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
KhC10 [2,587,803 / 2,600,547]
Amino acid sequence
Length: 820
>KH.C10.346.v1.A.nonSL6-1
YLENMSGEEMDALSESEDDTDITIDEVPGTNKKTQNDVNELLSILDDGYTSEAELNTRKL
VTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDKDVVAMARTGS
GKTAAFLIPMFEKLQGAQSGAGARALLLSPTRELALQTLKFVKELGRFTSLRTACILGGD
SMDEQFSAMHENPDVTIATPGRLMHVLIEMELRLSNIHYVVFDEADRLFELGFQEQLHEV
LHRLPDDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLAFLHLREDDKL
PALIHLLRNVFKETEQTVVFVSTKHHVEFVKDVLKLFSINCSYVYSSLDHTARKINIAKF
RNKKTMVLIVTDVAARGLDIPMLDNVINFSFPAKSKLFVHRVGRVARAGRTGTAYSLVCP
EELAYVIDLHLFLGRPLNFAKTGQTYQAWDNVYGRVSQRIIDEEQAALQNIKNNSDLQAL
LKVAQNAYKQYLKSRPAASSESIKRSREILQSTNIALHPIYDESGDTSEEARLELLSSVR
KYKPNSTIFEIGATAKSTGSYVMKKTRKRHVKFVEKHQQKLRKLAEKDEVSALQVKENIP
EVVNEEEEEDLKNTFSKIVRPTNNIREFTEMKKKKKKKRTAKDFKDSEFYIDYKPKDHNT
EAGLSIGNGRTNFAKEASNVTLDLIGDEDKTLRQQKMQRKVWDRKKKRFVNAQDAGPTAP
KKKIRTESGALISSTYKKNIYQEWKKKTKLADRDEEVYTGDGTSGRWRAGQNRRLSGKQQ
NSNSKIKSELKRPEQILKQRKLQAQKKKNQQKRRKPKGRR
Nucleotide sequence
Length: 2,969
>KH2012:KH.C10.346.v1.A.nonSL6-1
GATTTTTGCTACTGTGATTTAACTGATATTTGGAAAACATGAGTGGAGAAGAGATGGATG
CGCTTTCGGAGAGTGAAGATGATACAGATATCACCATTGATGAGGTGCCTGGTACAAATA
AGAAGACTCAAAACGATGTGAATGAGCTCCTCTCGATCCTGGATGATGGATACACATCGG
AGGCGGAGCTTAACACAAGAAAGTTGGTCACGCAGATGAACAGGAAGAAAAAGAAGTCCG
GAGGTTTCCAATCCATGGGTTTATCACATTCAGTGTTTAAAGGAGTAATCCGCAAAGGTT
ATAAAGTACCAACTCCTATTCAAAGGAAGTGTATTCCACTCATACTAAGCGACAAAGATG
TGGTTGCCATGGCTCGTACAGGGAGTGGGAAGACGGCTGCTTTCCTTATTCCGATGTTTG
AGAAATTGCAAGGTGCACAAAGTGGTGCAGGGGCAAGAGCACTTCTGCTTTCTCCCACAA
GAGAACTGGCATTGCAGACACTTAAGTTTGTAAAAGAGCTCGGAAGATTCACTTCTTTGC
GTACGGCGTGTATACTTGGGGGTGACAGCATGGATGAGCAGTTCTCGGCCATGCATGAAA
ACCCCGATGTCACCATTGCCACCCCCGGTCGTCTCATGCACGTCCTTATCGAAATGGAAC
TCAGATTATCGAACATCCATTATGTTGTGTTTGACGAAGCGGACAGGTTATTTGAGCTTG
GTTTCCAGGAGCAACTCCACGAGGTCCTCCACCGTCTCCCTGATGATCGTCAAACTCTTC
TTTTCTCAGCCACACTCCCCAAACAACTTGTGGAGTTCGCAAAAGCCGGTTTAAACGACC
CTACACTAGTCCGACTTGATCTTGACTCAAAACTTAGTGACCAACTCAAGCTAGCGTTCC
TGCATCTTCGTGAAGATGACAAACTCCCAGCTTTGATTCATCTCCTCCGGAACGTGTTCA
AGGAGACGGAGCAAACCGTCGTTTTTGTTTCGACGAAGCATCACGTGGAGTTTGTAAAAG
ATGTCCTTAAGTTGTTCAGCATCAACTGCTCGTACGTTTACAGTAGTCTTGACCATACTG
CTCGTAAAATCAACATCGCAAAGTTCCGGAACAAAAAGACAATGGTGCTCATTGTCACGG
ATGTTGCAGCGAGAGGACTGGACATCCCAATGCTCGATAACGTCATCAATTTCTCATTCC
CGGCAAAATCGAAGTTATTTGTTCACAGAGTTGGTCGTGTAGCACGAGCGGGACGCACAG
GTACCGCTTACTCCCTCGTGTGTCCGGAAGAACTTGCTTACGTCATCGATCTCCATCTTT
TCCTTGGACGACCTTTGAATTTTGCGAAAACTGGACAAACTTATCAAGCATGGGACAATG
TATATGGTCGCGTGTCACAGAGGATCATAGATGAGGAACAAGCTGCTCTGCAGAACATTA
AGAACAATTCTGATCTCCAAGCTTTGCTTAAAGTTGCACAGAATGCATATAAACAGTATT
TAAAATCACGGCCTGCTGCTTCAAGCGAGTCAATCAAACGATCACGAGAAATTCTTCAAA
GTACTAATATTGCTCTGCACCCAATTTATGACGAGAGTGGTGATACATCGGAAGAAGCAA
GACTAGAGTTACTTTCATCTGTTCGAAAATATAAACCTAATTCTACAATCTTTGAAATTG
GGGCAACAGCAAAGAGCACGGGTTCATATGTTATGAAGAAGACCAGGAAGAGGCATGTCA
AGTTTGTTGAGAAACATCAACAGAAACTGAGGAAGCTCGCTGAGAAGGATGAGGTGTCAG
CTCTTCAGGTCAAGGAGAATATTCCGGAAGTTGTTAACGAAGAGGAAGAAGAAGATCTCA
AGAATACGTTCTCAAAAATAGTCCGACCTACCAACAATATCAGAGAGTTTACTGAGATGA
AGAAAAAGAAGAAGAAAAAACGAACAGCTAAAGATTTTAAGGATTCCGAATTCTACATCG
ACTATAAACCGAAAGATCATAACACAGAAGCGGGTTTGAGCATCGGTAACGGTCGAACTA
ACTTTGCAAAGGAAGCTTCAAACGTGACATTGGATCTTATCGGAGATGAAGATAAAACAC
TCCGCCAACAAAAAATGCAAAGAAAAGTTTGGGATCGGAAGAAGAAGAGGTTCGTCAATG
CTCAGGATGCGGGACCAACTGCTCCTAAGAAGAAGATCAGGACTGAGAGCGGTGCCCTTA
TATCCTCCACTTACAAGAAGAACATATACCAAGAGTGGAAGAAGAAGACCAAGTTGGCTG
ATCGTGATGAAGAAGTCTATACTGGGGATGGAACAAGTGGAAGATGGAGAGCTGGTCAAA
ATAGGAGACTAAGCGGAAAGCAACAAAATTCAAACTCTAAAATAAAATCTGAACTAAAAC
GACCAGAACAAATTTTAAAGCAGCGTAAATTGCAAGCGCAAAAAAAGAAAAATCAACAAA
AAAGAAGAAAACCAAAAGGCAGAAGATGAAATTTATCATAAAACACTTATTCTAAAAATT
GTACTTCTTGTTTTATTTCCACATTAAGGTGGATGTACACAGTATCCTGAATTTGTCCGT
TTTGTCTGGATTTCGCTGCCGCATGCGGAATTGGACACGAGTTTGCATACGACTTCGCAT
GCGAATTCGCACGCCGGATACTATGTACAGCCACCTTTACTATTTCTTGCTTGTTTCTCC
AAAGTTGGGTTATTTCCTTTGTGCAACTGTTTAGATAGCAGTGGTTCTTAACCTTTGGCT
CATATAGGCTTTTTGGAAACGTTAAAAATACTGACCAGATACAGCCTTACTGTTAAAAAC
AGGATCTGGGTTTAACAAGTTTGGTTAAGAACCAAATTTTCACCTTTTGAATATGTGGAT
AGTTAAGATCTATACAAAAAATCACTATAGTATGGTGAAACATTGGTGCAAATGTATTCT
TTTTGCTAAACTGACAAATCGGTTCACAG
| PANTHER |
DDX54/DBP10 (IPR033517) - T[50-692] 1.5E-172 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[72-100] 9.745 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[91-287] 2.2E-57 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[96-261] 3.6E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[103-275] 32.025 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[142-428] 1.06E-64 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[221-229] . |
| CDD |
Helicase_C (IPR001650) - T[296-417] 9.49247E-31 |
| Pfam |
Helicase_C (IPR001650) - T[299-409] 9.2E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[302-454] 17.505 |
| SMART |
Helicase_C (IPR001650) - T[328-409] 1.6E-22 |
| ProDom |
DBP10_C (IPR012541) - T[673-756] 9.0E-14 |
| SMART |
DBP10_C (IPR012541) - T[683-747] 4.3E-31 |
| Pfam |
DBP10_C (IPR012541) - T[683-747] 6.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 35.097 % | 241 | 3.54E-67 |
| DDX27_HUMAN | 37.288 % | 247 | 2.52E-70 |
| DDX54_HUMAN | 52 % | 764 | 0 |