- Clone 'AHC0AAA172YB24' >
- Clone 'AHC0AAA182YN24' >
- Clone 'AHC0AAA201YE07' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.C10.346.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.346.v1.A.nonSL5-1
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
KhC10 [2,587,803 / 2,600,520]
Amino acid sequence
Length: 819
>KH.C10.346.v1.A.nonSL5-1
LENMSGEEMDALSESEDDTDITIDEVPGTNKKTQNDVNELLSILDDGYTSEAELNTRKLV
TQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDKDVVAMARTGSG
KTAAFLIPMFEKLQGAQSGAGARALLLSPTRELALQTLKFVKELGRFTSLRTACILGGDS
MDEQFSAMHENPDVTIATPGRLMHVLIEMELRLSNIHYVVFDEADRLFELGFQEQLHEVL
HRLPDDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLAFLHLREDDKLP
ALIHLLRNVFKETEQTVVFVSTKHHVEFVKDVLKLFSINCSYVYSSLDHTARKINIAKFR
NKKTMVLIVTDVAARGLDIPMLDNVINFSFPAKSKLFVHRVGRVARAGRTGTAYSLVCPE
ELAYVIDLHLFLGRPLNFAKTGQTYQAWDNVYGRVSQRIIDEEQAALQNIKNNSDLQALL
KVAQNAYKQYLKSRPAASSESIKRSREILQSTNIALHPIYDESGDTSEEARLELLSSVRK
YKPNSTIFEIGATAKSTGSYVMKKTRKRHVKFVEKHQQKLRKLAEKDEVSALQVKENIPE
VVNEEEEEDLKNTFSKIVRPTNNIREFTEMKKKKKKKRTAKDFKDSEFYIDYKPKDHNTE
AGLSIGNGRTNFAKEASNVTLDLIGDEDKTLRQQKMQRKVWDRKKKRFVNAQDAGPTAPK
KKIRTESGALISSTYKKNIYQEWKKKTKLADRDEEVYTGDGTSGRWRAGQNRRLSGKQQN
SNSKIKSELKRPEQILKQRKLQAQKKKNQQKRRKPKGRR
Nucleotide sequence
Length: 2,942
>KH2012:KH.C10.346.v1.A.nonSL5-1
ATTTGGAAAACATGAGTGGAGAAGAGATGGATGCGCTTTCGGAGAGTGAAGATGATACAG
ATATCACCATTGATGAGGTGCCTGGTACAAATAAGAAGACTCAAAACGATGTGAATGAGC
TCCTCTCGATCCTGGATGATGGATACACATCGGAGGCGGAGCTTAACACAAGAAAGTTGG
TCACGCAGATGAACAGGAAGAAAAAGAAGTCCGGAGGTTTCCAATCCATGGGTTTATCAC
ATTCAGTGTTTAAAGGAGTAATCCGCAAAGGTTATAAAGTACCAACTCCTATTCAAAGGA
AGTGTATTCCACTCATACTAAGCGACAAAGATGTGGTTGCCATGGCTCGTACAGGGAGTG
GGAAGACGGCTGCTTTCCTTATTCCGATGTTTGAGAAATTGCAAGGTGCACAAAGTGGTG
CAGGGGCAAGAGCACTTCTGCTTTCTCCCACAAGAGAACTGGCATTGCAGACACTTAAGT
TTGTAAAAGAGCTCGGAAGATTCACTTCTTTGCGTACGGCGTGTATACTTGGGGGTGACA
GCATGGATGAGCAGTTCTCGGCCATGCATGAAAACCCCGATGTCACCATTGCCACCCCCG
GTCGTCTCATGCACGTCCTTATCGAAATGGAACTCAGATTATCGAACATCCATTATGTTG
TGTTTGACGAAGCGGACAGGTTATTTGAGCTTGGTTTCCAGGAGCAACTCCACGAGGTCC
TCCACCGTCTCCCTGATGATCGTCAAACTCTTCTTTTCTCAGCCACACTCCCCAAACAAC
TTGTGGAGTTCGCAAAAGCCGGTTTAAACGACCCTACACTAGTCCGACTTGATCTTGACT
CAAAACTTAGTGACCAACTCAAGCTAGCGTTCCTGCATCTTCGTGAAGATGACAAACTCC
CAGCTTTGATTCATCTCCTCCGGAACGTGTTCAAGGAGACGGAGCAAACCGTCGTTTTTG
TTTCGACGAAGCATCACGTGGAGTTTGTAAAAGATGTCCTTAAGTTGTTCAGCATCAACT
GCTCGTACGTTTACAGTAGTCTTGACCATACTGCTCGTAAAATCAACATCGCAAAGTTCC
GGAACAAAAAGACAATGGTGCTCATTGTCACGGATGTTGCAGCGAGAGGACTGGACATCC
CAATGCTCGATAACGTCATCAATTTCTCATTCCCGGCAAAATCGAAGTTATTTGTTCACA
GAGTTGGTCGTGTAGCACGAGCGGGACGCACAGGTACCGCTTACTCCCTCGTGTGTCCGG
AAGAACTTGCTTACGTCATCGATCTCCATCTTTTCCTTGGACGACCTTTGAATTTTGCGA
AAACTGGACAAACTTATCAAGCATGGGACAATGTATATGGTCGCGTGTCACAGAGGATCA
TAGATGAGGAACAAGCTGCTCTGCAGAACATTAAGAACAATTCTGATCTCCAAGCTTTGC
TTAAAGTTGCACAGAATGCATATAAACAGTATTTAAAATCACGGCCTGCTGCTTCAAGCG
AGTCAATCAAACGATCACGAGAAATTCTTCAAAGTACTAATATTGCTCTGCACCCAATTT
ATGACGAGAGTGGTGATACATCGGAAGAAGCAAGACTAGAGTTACTTTCATCTGTTCGAA
AATATAAACCTAATTCTACAATCTTTGAAATTGGGGCAACAGCAAAGAGCACGGGTTCAT
ATGTTATGAAGAAGACCAGGAAGAGGCATGTCAAGTTTGTTGAGAAACATCAACAGAAAC
TGAGGAAGCTCGCTGAGAAGGATGAGGTGTCAGCTCTTCAGGTCAAGGAGAATATTCCGG
AAGTTGTTAACGAAGAGGAAGAAGAAGATCTCAAGAATACGTTCTCAAAAATAGTCCGAC
CTACCAACAATATCAGAGAGTTTACTGAGATGAAGAAAAAGAAGAAGAAAAAACGAACAG
CTAAAGATTTTAAGGATTCCGAATTCTACATCGACTATAAACCGAAAGATCATAACACAG
AAGCGGGTTTGAGCATCGGTAACGGTCGAACTAACTTTGCAAAGGAAGCTTCAAACGTGA
CATTGGATCTTATCGGAGATGAAGATAAAACACTCCGCCAACAAAAAATGCAAAGAAAAG
TTTGGGATCGGAAGAAGAAGAGGTTCGTCAATGCTCAGGATGCGGGACCAACTGCTCCTA
AGAAGAAGATCAGGACTGAGAGCGGTGCCCTTATATCCTCCACTTACAAGAAGAACATAT
ACCAAGAGTGGAAGAAGAAGACCAAGTTGGCTGATCGTGATGAAGAAGTCTATACTGGGG
ATGGAACAAGTGGAAGATGGAGAGCTGGTCAAAATAGGAGACTAAGCGGAAAGCAACAAA
ATTCAAACTCTAAAATAAAATCTGAACTAAAACGACCAGAACAAATTTTAAAGCAGCGTA
AATTGCAAGCGCAAAAAAAGAAAAATCAACAAAAAAGAAGAAAACCAAAAGGCAGAAGAT
GAAATTTATCATAAAACACTTATTCTAAAAATTGTACTTCTTGTTTTATTTCCACATTAA
GGTGGATGTACACAGTATCCTGAATTTGTCCGTTTTGTCTGGATTTCGCTGCCGCATGCG
GAATTGGACACGAGTTTGCATACGACTTCGCATGCGAATTCGCACGCCGGATACTATGTA
CAGCCACCTTTACTATTTCTTGCTTGTTTCTCCAAAGTTGGGTTATTTCCTTTGTGCAAC
TGTTTAGATAGCAGTGGTTCTTAACCTTTGGCTCATATAGGCTTTTTGGAAACGTTAAAA
ATACTGACCAGATACAGCCTTACTGTTAAAAACAGGATCTGGGTTTAACAAGTTTGGTTA
AGAACCAAATTTTCACCTTTTGAATATGTGGATAGTTAAGATCTATACAAAAAATCACTA
TAGTATGGTGAAACATTGGTGCAAATGTATTCTTTTTGCTAAACTGACAAATCGGTTCAC
AG
| PANTHER |
DDX54/DBP10 (IPR033517) - T[49-691] 1.4E-172 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[71-99] 9.745 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[90-286] 2.2E-57 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[95-260] 3.6E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[102-274] 32.025 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[141-427] 1.06E-64 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[220-228] . |
| CDD |
Helicase_C (IPR001650) - T[295-416] 9.47935E-31 |
| Pfam |
Helicase_C (IPR001650) - T[298-408] 9.2E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[301-453] 17.505 |
| SMART |
Helicase_C (IPR001650) - T[327-408] 1.6E-22 |
| ProDom |
DBP10_C (IPR012541) - T[672-755] 8.0E-14 |
| SMART |
DBP10_C (IPR012541) - T[682-746] 4.3E-31 |
| Pfam |
DBP10_C (IPR012541) - T[682-746] 6.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 35.097 % | 241 | 3.35E-67 |
| DDX27_HUMAN | 37.288 % | 246 | 2.77E-70 |
| DDX54_HUMAN | 52 % | 764 | 0 |