- Transcript 'KH2012:KH.C5.5.v1.A....' >
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- Transcript 'Haaura.CG.MTP2014.S5...' >
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- Transcript 'KH2012:KH.C10.346.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.346.v1.A.ND1-1
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
KhC10 [2,587,803 / 2,600,582]
Amino acid sequence
Length: 820
>KH.C10.346.v1.A.ND1-1
YLENMSGEEMDALSESEDDTDITIDEVPGTNKKTQNDVNELLSILDDGYTSEAELNTRKL
VTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDKDVVAMARTGS
GKTAAFLIPMFEKLQGAQSGAGARALLLSPTRELALQTLKFVKELGRFTSLRTACILGGD
SMDEQFSAMHENPDVTIATPGRLMHVLIEMELRLSNIHYVVFDEADRLFELGFQEQLHEV
LHRLPDDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLAFLHLREDDKL
PALIHLLRNVFKETEQTVVFVSTKHHVEFVKDVLKLFSINCSYVYSSLDHTARKINIAKF
RNKKTMVLIVTDVAARGLDIPMLDNVINFSFPAKSKLFVHRVGRVARAGRTGTAYSLVCP
EELAYVIDLHLFLGRPLNFAKTGQTYQAWDNVYGRVSQRIIDEEQAALQNIKNNSDLQAL
LKVAQNAYKQYLKSRPAASSESIKRSREILQSTNIALHPIYDESGDTSEEARLELLSSVR
KYKPNSTIFEIGATAKSTGSYVMKKTRKRHVKFVEKHQQKLRKLAEKDEVSALQVKENIP
EVVNEEEEEDLKNTFSKIVRPTNNIREFTEMKKKKKKKRTAKDFKDSEFYIDYKPKDHNT
EAGLSIGNGRTNFAKEASNVTLDLIGDEDKTLRQQKMQRKVWDRKKKRFVNAQDAGPTAP
KKKIRTESGALISSTYKKNIYQEWKKKTKLADRDEEVYTGDGTSGRWRAGQNRRLSGKQQ
NSNSKIKSELKRPEQILKQRKLQAQKKKNQQKRRKPKGRR
Nucleotide sequence
Length: 3,004
>KH2012:KH.C10.346.v1.A.ND1-1
TTTTTTTGCAGCTCCAGTTTGCTTGTCGCTTTCTCGATTTTTGCTACTGTGATTTAACTG
ATATTTGGAAAACATGAGTGGAGAAGAGATGGATGCGCTTTCGGAGAGTGAAGATGATAC
AGATATCACCATTGATGAGGTGCCTGGTACAAATAAGAAGACTCAAAACGATGTGAATGA
GCTCCTCTCGATCCTGGATGATGGATACACATCGGAGGCGGAGCTTAACACAAGAAAGTT
GGTCACGCAGATGAACAGGAAGAAAAAGAAGTCCGGAGGTTTCCAATCCATGGGTTTATC
ACATTCAGTGTTTAAAGGAGTAATCCGCAAAGGTTATAAAGTACCAACTCCTATTCAAAG
GAAGTGTATTCCACTCATACTAAGCGACAAAGATGTGGTTGCCATGGCTCGTACAGGGAG
TGGGAAGACGGCTGCTTTCCTTATTCCGATGTTTGAGAAATTGCAAGGTGCACAAAGTGG
TGCAGGGGCAAGAGCACTTCTGCTTTCTCCCACAAGAGAACTGGCATTGCAGACACTTAA
GTTTGTAAAAGAGCTCGGAAGATTCACTTCTTTGCGTACGGCGTGTATACTTGGGGGTGA
CAGCATGGATGAGCAGTTCTCGGCCATGCATGAAAACCCCGATGTCACCATTGCCACCCC
CGGTCGTCTCATGCACGTCCTTATCGAAATGGAACTCAGATTATCGAACATCCATTATGT
TGTGTTTGACGAAGCGGACAGGTTATTTGAGCTTGGTTTCCAGGAGCAACTCCACGAGGT
CCTCCACCGTCTCCCTGATGATCGTCAAACTCTTCTTTTCTCAGCCACACTCCCCAAACA
ACTTGTGGAGTTCGCAAAAGCCGGTTTAAACGACCCTACACTAGTCCGACTTGATCTTGA
CTCAAAACTTAGTGACCAACTCAAGCTAGCGTTCCTGCATCTTCGTGAAGATGACAAACT
CCCAGCTTTGATTCATCTCCTCCGGAACGTGTTCAAGGAGACGGAGCAAACCGTCGTTTT
TGTTTCGACGAAGCATCACGTGGAGTTTGTAAAAGATGTCCTTAAGTTGTTCAGCATCAA
CTGCTCGTACGTTTACAGTAGTCTTGACCATACTGCTCGTAAAATCAACATCGCAAAGTT
CCGGAACAAAAAGACAATGGTGCTCATTGTCACGGATGTTGCAGCGAGAGGACTGGACAT
CCCAATGCTCGATAACGTCATCAATTTCTCATTCCCGGCAAAATCGAAGTTATTTGTTCA
CAGAGTTGGTCGTGTAGCACGAGCGGGACGCACAGGTACCGCTTACTCCCTCGTGTGTCC
GGAAGAACTTGCTTACGTCATCGATCTCCATCTTTTCCTTGGACGACCTTTGAATTTTGC
GAAAACTGGACAAACTTATCAAGCATGGGACAATGTATATGGTCGCGTGTCACAGAGGAT
CATAGATGAGGAACAAGCTGCTCTGCAGAACATTAAGAACAATTCTGATCTCCAAGCTTT
GCTTAAAGTTGCACAGAATGCATATAAACAGTATTTAAAATCACGGCCTGCTGCTTCAAG
CGAGTCAATCAAACGATCACGAGAAATTCTTCAAAGTACTAATATTGCTCTGCACCCAAT
TTATGACGAGAGTGGTGATACATCGGAAGAAGCAAGACTAGAGTTACTTTCATCTGTTCG
AAAATATAAACCTAATTCTACAATCTTTGAAATTGGGGCAACAGCAAAGAGCACGGGTTC
ATATGTTATGAAGAAGACCAGGAAGAGGCATGTCAAGTTTGTTGAGAAACATCAACAGAA
ACTGAGGAAGCTCGCTGAGAAGGATGAGGTGTCAGCTCTTCAGGTCAAGGAGAATATTCC
GGAAGTTGTTAACGAAGAGGAAGAAGAAGATCTCAAGAATACGTTCTCAAAAATAGTCCG
ACCTACCAACAATATCAGAGAGTTTACTGAGATGAAGAAAAAGAAGAAGAAAAAACGAAC
AGCTAAAGATTTTAAGGATTCCGAATTCTACATCGACTATAAACCGAAAGATCATAACAC
AGAAGCGGGTTTGAGCATCGGTAACGGTCGAACTAACTTTGCAAAGGAAGCTTCAAACGT
GACATTGGATCTTATCGGAGATGAAGATAAAACACTCCGCCAACAAAAAATGCAAAGAAA
AGTTTGGGATCGGAAGAAGAAGAGGTTCGTCAATGCTCAGGATGCGGGACCAACTGCTCC
TAAGAAGAAGATCAGGACTGAGAGCGGTGCCCTTATATCCTCCACTTACAAGAAGAACAT
ATACCAAGAGTGGAAGAAGAAGACCAAGTTGGCTGATCGTGATGAAGAAGTCTATACTGG
GGATGGAACAAGTGGAAGATGGAGAGCTGGTCAAAATAGGAGACTAAGCGGAAAGCAACA
AAATTCAAACTCTAAAATAAAATCTGAACTAAAACGACCAGAACAAATTTTAAAGCAGCG
TAAATTGCAAGCGCAAAAAAAGAAAAATCAACAAAAAAGAAGAAAACCAAAAGGCAGAAG
ATGAAATTTATCATAAAACACTTATTCTAAAAATTGTACTTCTTGTTTTATTTCCACATT
AAGGTGGATGTACACAGTATCCTGAATTTGTCCGTTTTGTCTGGATTTCGCTGCCGCATG
CGGAATTGGACACGAGTTTGCATACGACTTCGCATGCGAATTCGCACGCCGGATACTATG
TACAGCCACCTTTACTATTTCTTGCTTGTTTCTCCAAAGTTGGGTTATTTCCTTTGTGCA
ACTGTTTAGATAGCAGTGGTTCTTAACCTTTGGCTCATATAGGCTTTTTGGAAACGTTAA
AAATACTGACCAGATACAGCCTTACTGTTAAAAACAGGATCTGGGTTTAACAAGTTTGGT
TAAGAACCAAATTTTCACCTTTTGAATATGTGGATAGTTAAGATCTATACAAAAAATCAC
TATAGTATGGTGAAACATTGGTGCAAATGTATTCTTTTTGCTAAACTGACAAATCGGTTC
ACAG
| PANTHER |
DDX54/DBP10 (IPR033517) - T[50-692] 1.5E-172 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[72-100] 9.745 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[91-287] 2.2E-57 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[96-261] 3.6E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[103-275] 32.025 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[142-428] 1.06E-64 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[221-229] . |
| CDD |
Helicase_C (IPR001650) - T[296-417] 9.49247E-31 |
| Pfam |
Helicase_C (IPR001650) - T[299-409] 9.2E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[302-454] 17.505 |
| SMART |
Helicase_C (IPR001650) - T[328-409] 1.6E-22 |
| ProDom |
DBP10_C (IPR012541) - T[673-756] 9.0E-14 |
| SMART |
DBP10_C (IPR012541) - T[683-747] 4.3E-31 |
| Pfam |
DBP10_C (IPR012541) - T[683-747] 6.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 35.097 % | 241 | 3.54E-67 |
| DDX27_HUMAN | 37.288 % | 247 | 2.52E-70 |
| DDX54_HUMAN | 52 % | 764 | 0 |