- Transcript 'KH2012:KH.C10.111.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.111.v1.A.SL1-1
Possible name(s)
HSCB
Gene model
Location
KhC10 [3,241,608 / 3,243,924]
Amino acid sequence
Length: 268
>KH.C10.111.v1.A.SL1-1
SSMATTKTLTRLFSLSLQQTLRRNSSNSVLNITQRNCLHIYVQTQSFLPKVFVSNAKIKR
RYSTLVENAEELRSSKDVCWKCSKKVKTSELFCGSCGTVLPVKNSDSYFTLFNLQVDFNI
SSPLLQNKFKKLQKLLHPDKFSLKSSAEQEISESVSSKLNKAYFCLAKPLSRGLYMLKLQ
GIHLGENVSADDPEFLMEIMELNEQIAASNEETHKEIQSTVKSHLEELTTKIATEFRDNN
LHAAKEHLIRFKYYNNIDEKLRELIPPS
Nucleotide sequence
Length: 1,000
>KH2012:KH.C10.111.v1.A.SL1-1
ATATATTGGTATAGGTGGTTTTAAAGTTTTACTTGATTAGTGTTGTTTTAAACTCTTTAA
AGTAGCATGGCAACTACAAAAACCCTAACAAGACTTTTTTCTTTAAGTTTGCAGCAAACC
CTACGTCGGAACTCTTCAAATTCTGTCCTGAATATCACTCAAAGAAATTGCTTACATATA
TATGTTCAAACTCAAAGTTTTCTACCGAAAGTTTTTGTATCAAACGCCAAAATAAAACGT
AGATATTCAACTTTGGTGGAAAATGCAGAAGAGTTACGGTCTTCCAAAGATGTATGCTGG
AAATGCAGCAAGAAAGTAAAGACATCCGAACTTTTTTGTGGGAGCTGTGGAACTGTGTTA
CCAGTGAAAAACTCTGACAGTTACTTTACACTTTTCAATTTACAAGTTGATTTTAATATC
TCTTCACCACTGCTTCAAAACAAGTTTAAAAAACTGCAAAAACTTCTTCATCCTGACAAG
TTTTCATTAAAAAGCTCAGCTGAGCAGGAAATATCCGAATCTGTCTCTTCGAAACTGAAT
AAAGCTTATTTCTGTTTGGCCAAACCGTTGTCGCGTGGGTTATACATGCTAAAACTGCAA
GGTATACACCTTGGTGAAAATGTAAGTGCAGATGACCCGGAGTTTCTGATGGAAATTATG
GAACTTAATGAACAGATCGCGGCTTCAAATGAGGAGACACACAAAGAAATCCAGTCCACT
GTGAAGTCACATTTAGAAGAACTAACGACAAAAATAGCCACAGAGTTTCGTGACAACAAT
TTACATGCTGCCAAGGAACATTTAATAAGATTCAAATATTATAACAACATTGACGAAAAA
TTAAGGGAGTTAATACCGCCATCGTAATAAGTTTTAACCTGTTTATGCAACTGTGCACCT
AGAATAAATGTGTTTGCAAATGTAGCAATGACCTGAAGTACTCAATACTGCAACAAGGTT
TCTTCTAATAAAGTTACTTCAAAAAATGGTTGAAATTTGA
| PANTHER |
HscB (IPR004640) - T[15-264] 3.3E-66 |
| Gene3D |
J_dom_sf (IPR036869) - T[68-178] 2.4E-29 |
| SMART |
DnaJ_domain (IPR001623) - T[106-171] 0.0011 |
| SUPERFAMILY |
J_dom_sf (IPR036869) - T[107-179] 2.36E-12 |
| CDD |
DnaJ_domain (IPR001623) - T[114-163] 2.02226E-6 |
| TIGRFAM |
HscB (IPR004640) - T[119-265] 6.8E-21 |
| SUPERFAMILY |
HscB_C_sf (IPR036386) - T[185-265] 1.03E-14 |
| Gene3D |
HscB_C_sf (IPR036386) - T[188-268] 1.6E-20 |
| Pfam |
HscB_oligo_C (IPR009073) - T[192-261] 2.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HSC20_HUMAN | 36.19 % | 144 | 2.41E-42 |
