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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'KH2012:KH.S988.2.v2....'

Transcript Model

Transcript Id

KH2012:KH.S988.2.v2.A.nonSL5-1

Possible name(s)

GPS1; PSMD6

Gene model

KH2012:KH.S988.2

Location

KhS988 [8,982 / 12,149]

Sequences

Amino acid sequence

Length: 397

>KH.S988.2.v2.A.nonSL5-1
QDFNFVGKLNLKMPIENLEEEGLAKIPNLEIAQLEFQLTLDPLNAKVKDELLAFIKKDNM
SPYYEKVCKAFGFKLDEGLLEKMKNENTKELSKLDEKISEEVEYESDEKDALLSKAEFLC
KIGEKEGCLTVFRKAYDKTIALGHRLDIIFNLIRVGLFYLDHDLITRNIDKAKQLIDEGG
DWDRRNRLKVYQGLYSVAIRDFKSAAKLFLDTVSTFTSYELMDYQTFVTYTVYVCMLALD
RSQLREKVVKGSEILEVLFEEEATKEFLFSLYDCRYGKFFVRLAEVESRMKNDRFFHAHY
RYYVREMRVMAYTQLLESYRSLTLEYMANAFGVTVEFIDNELSRFIAVGRLHCKIDKVGG
VVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINI

Nucleotide sequence

Length: 1,544

>KH2012:KH.S988.2.v2.A.nonSL5-1
ATTGTTGTCGAGCCTTGGATTCTATTTCATATTAACAAGATTTTAACTTTGTTGGTAAAT
TAAACTTGAAAATGCCGATTGAAAACTTAGAAGAGGAAGGCTTGGCGAAAATCCCGAATC
TTGAAATTGCTCAACTCGAGTTCCAGCTAACTTTGGATCCGTTGAACGCGAAAGTTAAAG
ATGAGTTGCTCGCTTTTATCAAGAAAGACAACATGTCACCTTACTATGAGAAAGTTTGCA
AAGCTTTTGGATTTAAGTTGGATGAGGGTTTGTTGGAAAAGATGAAAAATGAAAACACAA
AAGAACTTTCGAAACTTGACGAGAAAATCTCTGAGGAAGTTGAATACGAGTCCGATGAAA
AAGACGCGTTGTTGTCGAAAGCAGAATTCCTTTGCAAGATTGGGGAGAAGGAAGGATGTT
TAACAGTGTTCCGTAAAGCTTACGATAAAACGATCGCGTTGGGCCATCGTCTCGATATTA
TTTTCAATCTTATTCGCGTTGGTTTGTTTTATTTGGACCATGATTTAATTACAAGGAATA
TTGATAAAGCTAAACAGTTGATTGACGAGGGGGGCGATTGGGATCGAAGGAACCGGTTGA
AAGTTTACCAAGGATTGTATTCGGTTGCCATCAGGGATTTCAAATCTGCCGCAAAGTTGT
TCCTTGATACGGTATCTACGTTCACGTCGTATGAGTTAATGGATTATCAAACATTCGTTA
CTTATACTGTGTATGTTTGCATGCTGGCGTTGGATCGCTCCCAACTACGAGAGAAGGTTG
TTAAGGGATCGGAAATACTTGAGGTTTTATTCGAGGAAGAAGCAACGAAAGAATTCTTGT
TTTCGCTTTACGATTGTCGATACGGAAAGTTCTTCGTTAGATTAGCTGAAGTTGAAAGTC
GGATGAAGAACGATCGTTTCTTCCACGCGCATTATCGATATTATGTTCGTGAGATGCGTG
TCATGGCTTACACACAACTCCTTGAGTCATATCGCAGTTTAACATTGGAATATATGGCTA
ATGCATTCGGGGTAACGGTGGAATTTATTGACAACGAACTTTCCCGTTTCATTGCGGTTG
GTCGTCTGCATTGCAAGATCGACAAAGTTGGCGGAGTTGTTGAAACCAATCGTCCCGACA
GCAAGAATTGGCAGTACCAAGAAACGATCAAGAAAGGGGACTTGTTGTTGAACCGGGTGC
AAAAGTTGTCGCGTGTTATCAATATTTAGGTTGAAAGTAAAATGTCAACTTTATTTGGAT
TCTTGTTGTTGTGATATTACATGTTAAGATTGGTTACCATGGAAACCCAACCATTGGGTC
AAAGTTCATGAAGTTGTTTTTATAATTCTGCTGACGTGTCTCTTTACCCCATAGTAAACC
GATGTAGCATGCGTCACTAAGGATCGTAATACATTATGTTGGTTGGGGATGCGGGGGGTA
GAATTTGTGCAAAAGTTGGTGAATGTTCATTGTTGGGCAATAACGTAACCGAAATTGGTT
GATGACGTCATAATCAATATGATTGTAAACCCGCAATCGCGTCG

InterProScan

PANTHER
PSMD6 (IPR035268) - T[19-397] 4.7E-175
Pfam
Rpn7/CSN1 (IPR019585) - T[76-247] 3.9E-53
Pfam
PCI_dom (IPR000717) - T[264-365] 1.4E-15
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[292-374] 7.0E-19
SMART
PCI_dom (IPR000717) - T[298-381] 6.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CSN1_HUMAN 22.593 % 85.9 3.77E-18
PSMD6_HUMAN 70.18 % 560 0