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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  2. Transcript 'KH2012:KH.S988.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.S988.2.v1.A.nonSL3-1

Possible name(s)

GPS1; PSMD6

Gene model

KH2012:KH.S988.2

Location

KhS988 [8,982 / 12,154]

Sequences

Amino acid sequence

Length: 233

>KH.S988.2.v1.A.nonSL3-1
WNFLCKKKSPLIDEGGDWDRRNRLKVYQGLYSVAIRDFKSAAKLFLDTVSTFTSYELMDY
QTFVTYTVYVCMLALDRSQLREKVVKGSEILEVLFEEEATKEFLFSLYDCRYGKFFVRLA
EVESRMKNDRFFHAHYRYYVREMRVMAYTQLLESYRSLTLEYMANAFGVTVEFIDNELSR
FIAVGRLHCKIDKVGGVVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINI

Nucleotide sequence

Length: 1,641

>KH2012:KH.S988.2.v1.A.nonSL3-1
AACTTATTGTTGTCGAGCCTTGGATTCTATTTCATATTAACAAGATTTTAACTTTGTTGG
TAAATTAAACTTGAAAATGCCGATTGAAAACTTAGAAGAGGAAGGCTTGGCGAAAATCCC
GAATCTTGAAATTGCTCAACTCGAGTTCCAGCTAACTTTGGATCCGTTGAACGCGAAAGT
TAAAGATGAGTTGCTCGCTTTTATCAAGAAAGACAACATGTCACCTTACTATGAGAAAGT
TTGCAAAGCTTTTGGATTTAAGTTGGATGAGGGTTTGTTGGAAAAGATGAAAAATGAAAA
CACAAAAGAACTTTCGAAACTTGACGAGAAAATCTCTGAGGAAGTTGAATACGAGTCCGA
TGAAAAAGACGCGTTGTTGTCGAAAGCAGAATTCCTTTGCAAGATTGGGGAGAAGGAAGG
ATGTTTAACAGTGTTCCGTAAAGCTTACGATAAAACGATCGCGTTGGGCCATCGTCTCGA
TATTATTTTCAATCTTATTCGCGTTGGTTTGTTTTATTTGGACCATGATTTAATTACAAG
GAATATTGATAAAGCTAAACATTTGTAAAGAAAAAATGTTACTAGCATATGGTTTATGCT
CTAAAGGACATTATGTTGGTATGATGGAACTTCCTTTGTAAGAAGAAGAGCCCGTTGATT
GACGAGGGGGGCGATTGGGATCGAAGGAACCGGTTGAAAGTTTACCAAGGATTGTATTCG
GTTGCCATCAGGGATTTCAAATCTGCCGCAAAGTTGTTCCTTGATACGGTATCTACGTTC
ACGTCGTATGAGTTAATGGATTATCAAACATTCGTTACTTATACTGTGTATGTTTGCATG
CTGGCGTTGGATCGCTCCCAACTACGAGAGAAGGTTGTTAAGGGATCGGAAATACTTGAG
GTTTTATTCGAGGAAGAAGCAACGAAAGAATTCTTGTTTTCGCTTTACGATTGTCGATAC
GGAAAGTTCTTCGTTAGATTAGCTGAAGTTGAAAGTCGGATGAAGAACGATCGTTTCTTC
CACGCGCATTATCGATATTATGTTCGTGAGATGCGTGTCATGGCTTACACACAACTCCTT
GAGTCATATCGCAGTTTAACATTGGAATATATGGCTAATGCATTCGGGGTAACGGTGGAA
TTTATTGACAACGAACTTTCCCGTTTCATTGCGGTTGGTCGTCTGCATTGCAAGATCGAC
AAAGTTGGCGGAGTTGTTGAAACCAATCGTCCCGACAGCAAGAATTGGCAGTACCAAGAA
ACGATCAAGAAAGGGGACTTGTTGTTGAACCGGGTGCAAAAGTTGTCGCGTGTTATCAAT
ATTTAGGTTGAAAGTAAAATGTCAACTTTATTTGGATTCTTGTTGTTGTGATATTACATG
TTAAGATTGGTTACCATGGAAACCCAACCATTGGGTCAAAGTTCATGAAGTTGTTTTTAT
AATTCTGCTGACGTGTCTCTTTACCCCATAGTAAACCGATGTAGCATGCGTCACTAAGGA
TCGTAATACATTATGTTGGTTGGGGATGCGGGGGGTAGAATTTGTGCAAAAGTTGGTGAA
TGTTCATTGTTGGGCAATAACGTAACCGAAATTGGTTGATGACGTCATAATCAATATGAT
TGTAAACCCGCAATCGCGTCG

InterProScan

PANTHER
PSMD6 (IPR035268) - T[6-233] 3.3E-123
Pfam
Rpn7/CSN1 (IPR019585) - T[10-83] 1.1E-24
Pfam
PCI_dom (IPR000717) - T[100-201] 4.7E-16
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[128-210] 2.95E-19
SMART
PCI_dom (IPR000717) - T[134-217] 6.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMD6_HUMAN 78.509 % 367 2.09E-128