- Transcript 'KH2012:KH.C1.1027.v1...' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.SL1-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,542 / 15,548]
Amino acid sequence
Length: 312
>KH.S988.1.v3.A.SL1-1
CPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIYKKSGKKWDH
IHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRINRAATYVRW
SPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNILLAAGCCDY
KAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSGDCLAMVSHG
SVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQFSTCGKDGNVVVWDNK
SLEASIAGLRIN
Nucleotide sequence
Length: 1,882
>KH2012:KH.S988.1.v3.A.SL1-1
ACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTT
TTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTG
CTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATC
ATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGA
CGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACG
GGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGAT
GGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCT
ACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCA
CCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATT
ACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAG
TTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTG
GATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACG
GCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTC
TTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGT
ACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACA
AGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGAT
CATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAA
GAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAG
CGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGA
TATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAAC
GATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGT
TAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAA
CAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATC
TCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAAT
AATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCA
TGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTG
GCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGAT
CCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAA
ATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGA
ATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTAT
CATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGA
ACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[15-283] 3.6E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[18-276] 5.1E-125 - T[283-310] 5.1E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[21-302] 3.07E-41 |
| SMART |
WD40_repeat (IPR001680) - T[57-96] 1.7E-6 - T[101-140] 80.0 - T[150-186] 3.0 - T[211-247] 180.0 - T[260-298] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[59-95] 6.7E-4 - T[156-184] 0.22 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[64-105] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[64-105] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 1.39E-115 |
| ARC1B_HUMAN | 58.915 % | 318 | 9.46E-108 |