- Transcript 'KH2012:KH.L99.5.v1.A...' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL8-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,482 / 15,548]
Amino acid sequence
Length: 332
>KH.S988.1.v3.A.nonSL8-1
FIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIA
LSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNG
EWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRST
IVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTG
WVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVY
GPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,942
>KH2012:KH.S988.1.v3.A.nonSL8-1
ATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAG
ACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTT
TTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTG
CTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATC
ATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGA
CGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACG
GGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGAT
GGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCT
ACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCA
CCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATT
ACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAG
TTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTG
GATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACG
GCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTC
TTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGT
ACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACA
AGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGAT
CATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAA
GAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAG
CGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGA
TATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAAC
GATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGT
TAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAA
CAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATC
TCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAAT
AATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCA
TGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTG
GCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGAT
CCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAA
ATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGA
ATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTAT
CATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGA
ACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[35-303] 4.4E-115 |
| PIRSF |
ARPC1 (IPR017383) - T[35-302] 3.9E-119 - T[297-324] 0.064 |
| PANTHER |
ARPC1 (IPR017383) - T[38-296] 6.7E-125 - T[303-330] 6.7E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[45-322] 5.04E-41 |
| SMART |
WD40_repeat (IPR001680) - T[77-116] 1.7E-6 - T[121-160] 80.0 - T[170-206] 3.0 - T[231-267] 180.0 - T[280-318] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[79-115] 7.3E-4 - T[176-204] 0.24 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[84-125] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[84-125] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 1.85E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.75E-107 |