- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL6-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,487 / 15,548]
Amino acid sequence
Length: 331
>KH.S988.1.v3.A.nonSL6-1
IVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIAL
SPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGE
WVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTI
VSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGW
VHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYG
PHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,937
>KH2012:KH.S988.1.v3.A.nonSL6-1
ATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGT
CCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAAC
TTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTG
AGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATT
CATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAAC
CGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAA
TGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCG
CCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTT
GAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATT
GTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAA
GCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGG
GGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGG
GTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGT
GTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCA
TTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGTACGGG
CCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCA
CTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGC
CTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAAC
AATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTG
TTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCT
ATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTT
TTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATG
AATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACA
CTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGAC
AACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTG
GGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTC
ATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAAT
GATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCAC
TAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACT
TTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCA
AGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCC
AACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGA
TTTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[34-301] 4.1E-119 - T[296-323] 0.068 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[34-302] 4.4E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[37-295] 6.6E-125 - T[302-329] 6.6E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[44-321] 6.71E-41 |
| SMART |
WD40_repeat (IPR001680) - T[76-115] 1.7E-6 - T[120-159] 80.0 - T[169-205] 3.0 - T[230-266] 180.0 - T[279-317] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[78-114] 7.3E-4 - T[175-203] 0.24 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[83-124] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[83-124] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 1.95E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.7E-107 |