- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL5-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,502 / 15,548]
Amino acid sequence
Length: 326
>KH.S988.1.v3.A.nonSL5-1
VERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSN
DVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQEL
VILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDW
HPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIA
FSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQFS
TCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,922
>KH2012:KH.S988.1.v3.A.nonSL5-1
GTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAAC
TTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCC
ATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAAC
GATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAA
CATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGC
GGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTG
GTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAG
TTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAAT
TGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGG
CATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCG
GCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACG
TTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCA
TTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCC
AAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTT
TGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGTACGGGCCACACCAGTTCTCA
ACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATT
GCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCAT
AATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAA
CACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGT
AATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTA
ACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTT
CGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTA
TTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATG
ACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGAT
GGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGC
AAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGG
TGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATT
AAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCAT
CATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTA
CTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACC
TAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTAT
TACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATA
AA
| PIRSF |
ARPC1 (IPR017383) - T[29-296] 3.9E-119 - T[291-318] 0.066 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[29-297] 4.1E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[32-290] 6.2E-125 - T[297-324] 6.2E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[33-316] 3.72E-41 |
| SMART |
WD40_repeat (IPR001680) - T[71-110] 1.7E-6 - T[115-154] 80.0 - T[164-200] 3.0 - T[225-261] 180.0 - T[274-312] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[73-109] 7.1E-4 - T[170-198] 0.24 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[78-119] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[78-119] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 2.13E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.3E-107 |