- Transcript 'KH2012:KH.C2.821.v1....' >
- Transcript 'KH2012:KH.C9.38.v11....' >
- Region 'REG00000121' >
- EST 'BW407569' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL4-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,527 / 15,548]
Amino acid sequence
Length: 317
>KH.S988.1.v3.A.nonSL4-1
FVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIYKKSG
KKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRINRAA
TYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNILLAA
GCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSGDCLA
MVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQFSTCGKDGNVV
VWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,897
>KH2012:KH.S988.1.v3.A.nonSL4-1
GTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAA
AAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATG
ACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCG
GGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCG
ATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTT
GGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAG
CGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCA
TGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGA
AACCTATCAGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGG
CTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAA
AACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTG
TGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAG
CGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAA
TCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTG
CAGGGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTG
TTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATG
TAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATC
AACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCC
AAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCAT
GTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATT
TTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAAC
CTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGA
GAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCG
TGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAA
TTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGC
GTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACAT
AAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATA
TACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATC
GCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACT
TTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCAC
AATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACA
ATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[20-288] 3.8E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[23-281] 5.5E-125 - T[288-315] 5.5E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[25-307] 3.71E-41 |
| SMART |
WD40_repeat (IPR001680) - T[62-101] 1.7E-6 - T[106-145] 80.0 - T[155-191] 3.0 - T[216-252] 180.0 - T[265-303] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[64-100] 6.8E-4 - T[161-189] 0.23 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[69-110] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[69-110] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 337 | 1.75E-115 |
| ARC1B_HUMAN | 58.915 % | 318 | 9.23E-108 |