- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL3-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,477 / 15,548]
Amino acid sequence
Length: 334
>KH.S988.1.v3.A.nonSL3-1
SDFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQ
IALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLT
NGEWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIR
STIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPC
TGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVC
VYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,947
>KH2012:KH.S988.1.v3.A.nonSL3-1
ATCAGATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCG
TGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGA
AGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCA
AATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATG
GGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCC
GAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTAC
TAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGT
ACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGT
TTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAG
ATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTG
CGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCC
TACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTG
TACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTC
CCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGA
GTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATG
CGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGA
CAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGA
GTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCA
TTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAA
TCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTA
TAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTT
TCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGG
GAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAG
CAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTG
CGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTG
ATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACA
CCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATG
ATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATAT
AAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCA
AACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGA
GTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCC
ATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCA
CCCGAACCGATTTCTGTTCGTTATAAA
| PIRSF |
ARPC1 (IPR017383) - T[37-304] 4.0E-119 - T[299-326] 0.064 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[37-305] 4.5E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[40-298] 6.9E-125 - T[305-332] 6.9E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[47-324] 6.71E-41 |
| SMART |
WD40_repeat (IPR001680) - T[79-118] 1.7E-6 - T[123-162] 80.0 - T[172-208] 3.0 - T[233-269] 180.0 - T[282-320] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[81-117] 7.4E-4 - T[178-206] 0.25 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[86-127] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[86-127] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 1.89E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.82E-107 |