- Transcript 'Cisavi.CG.ENS81.R58....' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL16-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,515 / 15,548]
Amino acid sequence
Length: 321
>KH.S988.1.v3.A.nonSL16-1
CCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSNDVLIY
KKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELVILRI
NRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWHPNNI
LLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAFSNSG
DCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQFSTCGKD
GNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,909
>KH2012:KH.S988.1.v3.A.nonSL16-1
ATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATAC
ATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATT
CATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTT
ACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAG
TTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAA
ACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTA
TTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAA
GTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGGTGGGTGAGCA
AACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACA
TTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAG
AAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGA
TGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTG
GCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAG
AATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGA
ACAGCATAATTGCAGGGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAG
ATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAA
TTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTAT
TACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAA
AAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTC
TATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCC
ATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTC
TTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGA
TAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCG
CTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCA
TCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTA
TAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAG
TATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGT
ATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAA
ACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAA
TCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATT
TGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTG
TTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[24-292] 3.9E-115 |
| PANTHER |
ARPC1 (IPR017383) - T[27-285] 5.8E-125 - T[292-319] 5.8E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[29-311] 3.42E-41 |
| SMART |
WD40_repeat (IPR001680) - T[66-105] 1.7E-6 - T[110-149] 80.0 - T[159-195] 3.0 - T[220-256] 180.0 - T[269-307] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[68-104] 7.0E-4 - T[165-193] 0.23 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[73-114] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[73-114] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 337 | 2.18E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.61E-107 |