- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'Cisavi.CG.ENS81.R91....' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- EST 'AHC0AAA229YC19_RM1' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL15-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,480 / 15,548]
Amino acid sequence
Length: 333
>KH.S988.1.v3.A.nonSL15-1
DFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQI
ALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTN
GEWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRS
TIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCT
GWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCV
YGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,944
>KH2012:KH.S988.1.v3.A.nonSL15-1
AGATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGT
AGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGT
TTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAAT
TGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGA
TCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAA
GACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAA
CGGGGAATGGGTGCAAGAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACG
ATGGTCGCCACAGGAAGATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTG
CTACTTTGAGTCCGATAATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATC
CACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGA
TTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTAC
AGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTAC
TGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCA
CGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTT
TCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGT
GTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAA
CAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTG
ATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTC
AAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCC
AGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAA
GATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCA
ACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAG
GTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAA
AACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGA
TCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATA
ATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCT
CATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATT
TGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAG
ATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAAC
AAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTC
GAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATT
ATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCC
GAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[36-304] 4.4E-115 |
| PIRSF |
ARPC1 (IPR017383) - T[36-303] 4.0E-119 - T[298-325] 0.064 |
| PANTHER |
ARPC1 (IPR017383) - T[39-297] 6.8E-125 - T[304-331] 6.8E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[46-323] 6.71E-41 |
| SMART |
WD40_repeat (IPR001680) - T[78-117] 1.7E-6 - T[122-161] 80.0 - T[171-207] 3.0 - T[232-268] 180.0 - T[281-319] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[80-116] 7.3E-4 - T[177-205] 0.24 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[85-126] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[85-126] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 2.12E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.89E-107 |