- Transcript 'KH2012:KH.C1.1027.v1...' >
- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL14-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,505 / 15,548]
Amino acid sequence
Length: 325
>KH.S988.1.v3.A.nonSL14-1
ERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSND
VLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQELV
ILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLDWH
PNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGIAF
SNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQFST
CGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,919
>KH2012:KH.S988.1.v3.A.nonSL14-1
GAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTT
TTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATT
AGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGAT
GTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACAT
ACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGT
GCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGGTG
ATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAGATAAGTTT
GCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATAATAATTGG
TGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGGATTGGCAT
CCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCT
TACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTT
GGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTT
TCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAA
GGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGG
TTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGTACGGGCCACACCAGTTCTCAACA
TGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCT
GGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAAT
CAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACAC
ATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAAT
ATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACT
CCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGA
TGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTT
CTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACC
AACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGA
ACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAA
CTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGC
CCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAA
AGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCAT
CTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTT
GACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAA
ACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTAC
TCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[28-296] 4.1E-115 |
| PIRSF |
ARPC1 (IPR017383) - T[28-295] 3.9E-119 - T[290-317] 0.066 |
| PANTHER |
ARPC1 (IPR017383) - T[31-289] 6.1E-125 - T[296-323] 6.1E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[32-315] 3.66E-41 |
| SMART |
WD40_repeat (IPR001680) - T[70-109] 1.7E-6 - T[114-153] 80.0 - T[163-199] 3.0 - T[224-260] 180.0 - T[273-311] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[72-108] 7.1E-4 - T[169-197] 0.23 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[77-118] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[77-118] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 1.99E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.47E-107 |