- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL11-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,497 / 15,548]
Amino acid sequence
Length: 327
>KH.S988.1.v3.A.nonSL11-1
FVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNS
NDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQE
LVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSLD
WHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHGI
AFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQF
STCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,927
>KH2012:KH.S988.1.v3.A.nonSL11-1
GTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCA
CGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTC
ACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACA
GCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAA
GCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTA
CGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAG
AATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAAG
ATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGATA
ATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTGG
ATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGT
TCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGA
TGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAA
TCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTG
TCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATT
GTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGTACGGGCCACACCAGT
TCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCAT
CTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTAC
ATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGA
ATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTG
CCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTC
TCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAAC
AAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAAT
TATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAAT
TAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCA
CCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCC
TGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACT
GTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATT
ACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTC
ATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATG
CTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTG
TGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACC
ATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCG
TTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[30-298] 4.2E-115 |
| PIRSF |
ARPC1 (IPR017383) - T[30-297] 4.0E-119 - T[292-319] 0.067 |
| PANTHER |
ARPC1 (IPR017383) - T[33-291] 6.3E-125 - T[298-325] 6.3E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[34-317] 3.85E-41 |
| SMART |
WD40_repeat (IPR001680) - T[72-111] 1.7E-6 - T[116-155] 80.0 - T[165-201] 3.0 - T[226-262] 180.0 - T[275-313] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[74-110] 7.1E-4 - T[171-199] 0.24 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[79-120] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[79-120] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 2.26E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.61E-107 |