- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.S988.1.v3....' >
- Transcript 'KH2012:KH.C1.1082.v1...' >
- Transcript 'KH2012:KH.S988.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v3.A.nonSL10-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,496 / 15,548]
Amino acid sequence
Length: 328
>KH.S988.1.v3.A.nonSL10-1
SFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPN
SNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQ
ELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFESDNNWWVSKHIKKPIRSTIVSL
DWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPCTGWVHG
IAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGVCVYGPHQ
FSTCGKDGNVVVWDNKSLEASIAGLRIN
Nucleotide sequence
Length: 1,928
>KH2012:KH.S988.1.v3.A.nonSL10-1
AGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCC
ACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTT
CACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAAC
AGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTA
AGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTT
ACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAA
GAATTGGTGATTCTTCGTATTAATCGAGCAGCGACGTACGTACGATGGTCGCCACAGGAA
GATAAGTTTGCTGTCGGAAGTTCATCACGCATGATTTCCGTTTGCTACTTTGAGTCCGAT
AATAATTGGTGGGTGAGCAAACATATCAAGAAACCTATCAGATCCACCATTGTTTCGTTG
GATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTG
TTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAG
ATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGA
ATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCT
GTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGAT
TGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGTATGCGTGTACGGGCCACACCAG
TTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCA
TCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTA
CATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAG
AATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATT
GCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCT
CTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAA
CAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAA
TTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAA
TTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCC
ACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTC
CTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACAC
TGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCAT
TACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCT
CATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTAT
GCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACT
GTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGAC
CATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTC
GTTATAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[31-299] 4.2E-115 |
| PIRSF |
ARPC1 (IPR017383) - T[31-298] 3.8E-119 - T[293-320] 0.063 |
| PANTHER |
ARPC1 (IPR017383) - T[34-292] 6.4E-125 - T[299-326] 6.4E-125 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[35-318] 4.94E-41 |
| SMART |
WD40_repeat (IPR001680) - T[73-112] 1.7E-6 - T[117-156] 80.0 - T[166-202] 3.0 - T[227-263] 180.0 - T[276-314] 13.0 |
| Pfam |
WD40_repeat (IPR001680) - T[75-111] 7.2E-4 - T[172-200] 0.24 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[80-121] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[80-121] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 62.069 % | 338 | 2.06E-115 |
| ARC1B_HUMAN | 58.915 % | 317 | 3.79E-107 |