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TRANSCRIPT CARD

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  1. EST 'AHC0AAA234YI03_RM1' > 
  2. Transcript 'KH2012:KH.S988.1.v2....'

Transcript Model

Transcript Id

KH2012:KH.S988.1.v2.A.SL1-1

Possible name(s)

ARPC1A; ARPC1B; CIAO1

Gene model

KH2012:KH.S988.1

Location

KhS988 [12,542 / 15,548]

Sequences

Amino acid sequence

Length: 223

>KH.S988.1.v2.A.SL1-1
STIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPC
TGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGH
DCNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTK
HKNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN

Nucleotide sequence

Length: 1,934

>KH2012:KH.S988.1.v2.A.SL1-1
ACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTT
TTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTG
CTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATC
ATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGA
CGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACG
GGGAATGGGTGCAAGAATTGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATT
TTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAA
ATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATG
CAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGC
GATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAA
TTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAAC
AGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGT
TCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAA
GCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACT
TCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCA
CACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTT
GAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTA
TTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAAT
AAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTC
TTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATC
CCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTT
CCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAAT
GACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTT
GTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAAC
TTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGC
ATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATT
GGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGAT
CAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAA
CCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTG
GATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGC
GCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAAC
AATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTT
CTGTTCGTTATAAA

InterProScan

PANTHER
ARPC1 (IPR017383) - T[1-221] 3.1E-67
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-209] 1.6E-67
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[2-141] 3.66E-15 - T[169-213] 3.66E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARC1A_HUMAN 49.565 % 213 3.88E-68
ARC1B_HUMAN 42.672 % 184 4.68E-57