- Transcript 'Boleac.CG.SB_v3.S194...' >
- Transcript 'KH2012:KH.C5.392.v1....' >
- Transcript 'KH2012:KH.C3.911.v1....' >
- Transcript 'KH2012:KH.C1.523.v2....' >
- Transcript 'KH2012:KH.S988.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v2.A.nonSL9-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,476 / 15,548]
Amino acid sequence
Length: 232
>KH.S988.1.v2.A.nonSL9-1
SDFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQ
IALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLT
NGEWVQELIHHCFVGLASEQHFTRGWLLRLQSLRVLGLHQRNQSKTWSYSLGEEDDVWMF
DAGVCDALYWMGSRNRIFKLWRLFSDGVPRQCALCRQRWWRININQDGVSSI
Nucleotide sequence
Length: 2,000
>KH2012:KH.S988.1.v2.A.nonSL9-1
AATCAGATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTC
GTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTG
AAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGC
AAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAAT
GGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCC
CGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTA
CTAACGGGGAATGGGTGCAAGAATTGATCCACCATTGTTTCGTTGGATTGGCATCCGAAC
AACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATC
AAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGT
TTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAAC
TCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGT
GGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGG
GAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGG
GATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGG
GGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAG
GCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTAC
GGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAG
TCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCA
TGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGA
AACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCG
TTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATA
TCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGA
TTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTA
ATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACA
ACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTC
GACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAA
TTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATG
CTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGC
AATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCC
CACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAAT
ACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAAT
TCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCA
TCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAAC
CGATTTCTGTTCGTTATAAA
| PANTHER |
ARPC1 (IPR017383) - T[34-129] 9.2E-39 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[37-135] 1.3E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[47-206] 1.19E-16 |
| SMART |
WD40_repeat (IPR001680) - T[79-118] 1.7E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[86-127] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[86-127] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 60.465 % | 117 | 5.02E-31 |
| ARC1B_HUMAN | 60.92 % | 119 | 1.07E-31 |