- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'KH2012:KH.S988.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v2.A.nonSL8-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,482 / 15,548]
Amino acid sequence
Length: 230
>KH.S988.1.v2.A.nonSL8-1
FIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIA
LSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNG
EWVQELIHHCFVGLASEQHFTRGWLLRLQSLRVLGLHQRNQSKTWSYSLGEEDDVWMFDA
GVCDALYWMGSRNRIFKLWRLFSDGVPRQCALCRQRWWRININQDGVSSI
Nucleotide sequence
Length: 1,994
>KH2012:KH.S988.1.v2.A.nonSL8-1
ATTTTATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAG
ACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTT
TTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTG
CTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATC
ATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGA
CGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACG
GGGAATGGGTGCAAGAATTGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATT
TTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAA
ATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATG
CAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGC
GATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAA
TTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAAC
AGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGT
TCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAA
GCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACT
TCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCA
CACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTT
GAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTA
TTATTACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAAT
AAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTC
TTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATC
CCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTT
CCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAAT
GACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTT
GTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAAC
TTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGC
ATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATT
GGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGAT
CAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAA
CCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTG
GATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGC
GCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAAC
AATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTT
CTGTTCGTTATAAA
| PANTHER |
ARPC1 (IPR017383) - T[32-127] 9.1E-39 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[35-133] 1.3E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[39-204] 1.47E-16 |
| SMART |
WD40_repeat (IPR001680) - T[77-116] 1.7E-6 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[84-125] 12.58 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[84-125] 11.787 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 60.465 % | 116 | 5.42E-31 |
| ARC1B_HUMAN | 60.92 % | 118 | 1.11E-31 |