- Transcript 'KH2012:KH.C13.20.v1....' >
- Transcript 'KH2012:KH.S988.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v2.A.nonSL6-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,487 / 15,548]
Amino acid sequence
Length: 229
>KH.S988.1.v2.A.nonSL6-1
IVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIAL
SPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGE
WVQELIHHCFVGLASEQHFTRGWLLRLQSLRVLGLHQRNQSKTWSYSLGEEDDVWMFDAG
VCDALYWMGSRNRIFKLWRLFSDGVPRQCALCRQRWWRININQDGVSSI
Nucleotide sequence
Length: 1,989
>KH2012:KH.S988.1.v2.A.nonSL6-1
ATTGTCGCCAGTTTCGTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGT
CCAGAGTCCACGAACTTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAAC
TTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTG
AGTCCAAACAGCAACGATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATT
CATACATTAAGCGAACATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAAC
CGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAA
TGGGTGCAAGAATTGATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACT
CGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAA
TCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGA
GTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTG
TTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAAC
ATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCAT
AATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAA
AGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGT
GTCGGCCATGAATATGTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCAC
TGATCTTACTACAAAGCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCA
GTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGC
ATCTATTGCTGGTCTTCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATT
ACATCATAATCAACTATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGA
GAATGAACACATAACGAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTAT
TGCCTGTAATATATTATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACC
TCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAA
ACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTA
ATTATTATTTCTTCCAATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAA
ATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTC
CACCGATGGAACGAACTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTT
CCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACA
CTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCA
TTACATTAAAAGTTTGGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTC
TCATCATCATCTGGGACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTA
TGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAAC
TGTGACCTAAACAATACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGA
CCATTATTACTCACACAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTT
CGTTATAAA
| PANTHER |
ARPC1 (IPR017383) - T[31-126] 9.0E-39 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[34-132] 1.3E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[44-203] 1.28E-16 |
| SMART |
WD40_repeat (IPR001680) - T[76-115] 1.7E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[83-124] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[83-124] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 60.465 % | 117 | 5.16E-31 |
| ARC1B_HUMAN | 60.92 % | 118 | 1.11E-31 |