- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S988.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S988.1.v2.A.nonSL5-1
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
KhS988 [12,502 / 15,548]
Amino acid sequence
Length: 224
>KH.S988.1.v2.A.nonSL5-1
VERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFGVHPISCHSWNHDRTQIALSPNSN
DVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRIVTCGADRNAYVWQLTNGEWVQEL
IHHCFVGLASEQHFTRGWLLRLQSLRVLGLHQRNQSKTWSYSLGEEDDVWMFDAGVCDAL
YWMGSRNRIFKLWRLFSDGVPRQCALCRQRWWRININQDGVSSI
Nucleotide sequence
Length: 1,974
>KH2012:KH.S988.1.v2.A.nonSL5-1
GTTGAAAGAAGTTATTGTTGTTGTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAAC
TTTTTATTCATACATTCCGTTGTAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCC
ATTAGTTGTCATTCATGGAATCATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAAC
GATGTTTTGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAA
CATACACTTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGC
GGTGCCGACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTG
ATCCACCATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTG
CGATTACAAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCC
TACAGTTTGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTG
TACTGGATGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTC
CCACGGCAGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGA
GTTTCTTCCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCA
CGATTGCAACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAA
CAAACTTGATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATAT
GTTTAAGATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAA
GCATAAGAACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGG
TAAAGATGGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCT
TCGAATTAATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACT
ATTATTACATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAAC
GAGAAAAAATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATT
ATTTCTATGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCG
TTCCCATCTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCC
GCTTCTTGTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCC
AATGATAATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCT
GTTCGCTAAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAA
CTTCATCGCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTA
ATGTATAGTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGC
ATAAGTATGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTT
GGCGTATATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGG
ACCAAACCATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCC
GGCAATCTTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAAT
ACATTTGATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACA
CAGTGTTTCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA
| PANTHER |
ARPC1 (IPR017383) - T[27-121] 9.9E-39 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[29-127] 1.2E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[39-198] 1.51E-16 |
| SMART |
WD40_repeat (IPR001680) - T[71-110] 1.7E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[78-119] 11.787 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[78-119] 12.58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 60.465 % | 116 | 6.41E-31 |
| ARC1B_HUMAN | 60.92 % | 118 | 1.23E-31 |