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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.62.v1.A...' > 
  2. Region 'REG00000196' > 
  3. Transcript 'KH2012:KH.C3.469.v1....' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'KH2012:KH.S988.1.v2....'

Transcript Model

Transcript Id

KH2012:KH.S988.1.v2.A.nonSL13-1

Possible name(s)

ARPC1A; ARPC1B; CIAO1

Gene model

KH2012:KH.S988.1

Location

KhS988 [12,689 / 15,548]

Sequences

Amino acid sequence

Length: 223

>KH.S988.1.v2.A.nonSL13-1
STIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPC
TGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGH
DCNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTK
HKNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN

Nucleotide sequence

Length: 1,787

>KH2012:KH.S988.1.v2.A.nonSL13-1
TGATTTACAAGAAATCCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACATACAC
TTAAAGTTACAGACATCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCG
ACAGAAACGCCTATGTTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGATCCACC
ATTGTTTCGTTGGATTGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTAC
AAAGCTTACGTGTTCTCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTT
TGGGGGAAGAAGATGACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGA
TGGGTTCACGGAATCGCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGC
AGTGTGCTCTCTGTCGCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTT
CCATTTAACGATTGTGTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGC
AACCCTGTGCTGTTCAAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTT
GATCAACCCCCTAAAGGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAG
ATGATGGATAAGAAAGGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAG
AACGCAATCATACAGGTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGAT
GGAAACGTTGTTGTTTGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATT
AATTAATATGTAACAATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTA
CATCATAATCAACTATACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAA
AATAAAACCCAAACTCGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTA
TGAATATCATGTATAATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCAT
CTTTAACATTTTCCGAACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTT
GTTGGAAAACCTGGGGTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATA
ATATTGGAGAGAATTAGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCT
AAACATCTCGTGCAACTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATC
GCTCAATGAATTCATGTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATA
GTAGGGTGGCGTGTTATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTA
TGTTAAACATAAGGTTCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTAT
ATGTTATATATACTCCATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAAC
CATCGTCATCGCTTTCCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATC
TTTCTGAACTTTTTGCTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTG
ATGATGTCACAATCCCACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTT
TCGTTCAACAATCTGTTTCACCCGAACCGATTTCTGTTCGTTATAAA

InterProScan

PANTHER
ARPC1 (IPR017383) - T[1-221] 3.1E-67
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-209] 1.6E-67
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[2-141] 3.66E-15 - T[169-213] 3.66E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARC1A_HUMAN 49.565 % 213 3.88E-68
ARC1B_HUMAN 42.672 % 184 4.68E-57