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  1. Transcript 'KH2012:KH.S988.1.v2....'

Transcript Model

Transcript Id

KH2012:KH.S988.1.v2.A.nonSL12-1

Possible name(s)

ARPC1A; ARPC1B; CIAO1

Gene model

KH2012:KH.S988.1

Location

KhS988 [12,524 / 15,548]

Sequences

Amino acid sequence

Length: 223

>KH.S988.1.v2.A.nonSL12-1
STIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGKKMTFGCLMQEFVMPC
TGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFNDCVWFGENSIIAGGH
DCNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMDKKGTVEATSTDLTTK
HKNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN

Nucleotide sequence

Length: 1,952

>KH2012:KH.S988.1.v2.A.nonSL12-1
GTTGTTTTGTTCGTGTAGACTGTCCAGAGTCCACGAACTTTTTATTCATACATTCCGTTG
TAAAAATGGGTGAAGTTTTTAACTTTGGGGTTCACCCCATTAGTTGTCATTCATGGAATC
ATGACCGCACGCAAATTGCTTTGAGTCCAAACAGCAACGATGTTTTGATTTACAAGAAAT
CCGGGAAGAAATGGGATCATATTCATACATTAAGCGAACATACACTTAAAGTTACAGACA
TCGATTGGGCCCCGAAGACGAACCGTATTGTTACGTGCGGTGCCGACAGAAACGCCTATG
TTTGGCAACTTACTAACGGGGAATGGGTGCAAGAATTGATCCACCATTGTTTCGTTGGAT
TGGCATCCGAACAACATTTTACTCGCGGCTGGTTGTTGCGATTACAAAGCTTACGTGTTC
TCGGCTTACATCAAAGAAATCAATCCAAAACCTGGTCCTACAGTTTGGGGGAAGAAGATG
ACGTTTGGATGTTTGATGCAGGAGTTTGTGATGCCTTGTACTGGATGGGTTCACGGAATC
GCATTTTCAAACTCTGGCGATTGTTTAGCGATGGTGTCCCACGGCAGTGTGCTCTCTGTC
GCCAAAGGTGGTGGAGAATTAACATCAATCAGGACGGAGTTTCTTCCATTTAACGATTGT
GTTTGGTTTGGGGAGAACAGCATAATTGCAGGGGGCCACGATTGCAACCCTGTGCTGTTC
AAAGTTGAAGGGGATTGTTCAAAAGTTGCGTTCGCCAACAAACTTGATCAACCCCCTAAA
GGAGGGGGTGGGGGAAAAGCTGTGTCGGCCATGAATATGTTTAAGATGATGGATAAGAAA
GGAACCGTAGAGGCGACTTCCACTGATCTTACTACAAAGCATAAGAACGCAATCATACAG
GTATGCGTGTACGGGCCACACCAGTTCTCAACATGTGGTAAAGATGGAAACGTTGTTGTT
TGGGACAACAAGTCACTTGAAGCATCTATTGCTGGTCTTCGAATTAATTAATATGTAACA
ATGGAGTGATCATGCCTATTATTACATCATAATCAACTATTATTACATCATAATCAACTA
TACCATTCAAGAAACAATAAAGAGAATGAACACATAACGAGAAAAAATAAAACCCAAACT
CGGAATCCAGCGTTGTTCTTTATTGCCTGTAATATATTATTTCTATGAATATCATGTATA
ATTTATAAGATATCTATCCCACCTCTCGTAACTCCTCGTTCCCATCTTTAACATTTTCCG
AACTTTCAACGATTTTTTCCGAAACAAGTTCGATGTCCGCTTCTTGTTGGAAAACCTGGG
GTGGGGAGGTTAATGAATGACTAATTATTATTTCTTCCAATGATAATATTGGAGAGAATT
AGCAGCAAAACAACACTTGTTAAATTAATGACCAACCTGTTCGCTAAACATCTCGTGCAA
CTTTGCGATCTCGACAACTTTTCCACCGATGGAACGAACTTCATCGCTCAATGAATTCAT
GTCTGATAATAATTGGGCATTTTCCTGTGCAAACTGTAATGTATAGTAGGGTGGCGTGTT
ATACACCTCATGCTCATTGGACACTGTAGGTGCCCAGCATAAGTATGTTAAACATAAGGT
TCATGATTTGGCAATGATCAGCATTACATTAAAAGTTTGGCGTATATGTTATATATACTC
CATATAAGATCCCACTAACCGTCTCATCATCATCTGGGACCAAACCATCGTCATCGCTTT
CCTCAAACAAATACTTTGGATTATGCTTTACTTGACCCGGCAATCTTTCTGAACTTTTTG
CTCGAGTCGAATTCAAGCGCAACTGTGACCTAAACAATACATTTGATGATGTCACAATCC
CACCCATTATCATCCAACAATGACCATTATTACTCACACAGTGTTTCGTTCAACAATCTG
TTTCACCCGAACCGATTTCTGTTCGTTATAAA

InterProScan

PANTHER
ARPC1 (IPR017383) - T[1-221] 3.1E-67
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-209] 1.6E-67
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[2-141] 3.66E-15 - T[169-213] 3.66E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARC1A_HUMAN 49.565 % 213 3.88E-68
ARC1B_HUMAN 42.672 % 184 4.68E-57